Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 PAU5YFL020C 369 nt7.57□□□□□ -1.2
PRP28P23394 PAM17YKR065C 594 nt7.57□□□□□ -1.2
PRP28P23394 snR4snR4 186 nt7.57□□□□□ -1.2
PRP28P23394 THI3YDL080C 1830 nt7.57□□□□□ -1.2
PRP28P23394 NAS2YIL007C 663 nt7.56□□□□□ -1.2
PRP28P23394 YNL067W-AYNL067W-A 147 nt7.56□□□□□ -1.2
PRP28P23394 SPE2YOL052C 1191 nt7.56□□□□□ -1.2
PRP28P23394 PGC1YPL206C 966 nt7.56□□□□□ -1.2
PRP28P23394 AAT1YKL106W 1356 nt7.56□□□□□ -1.2
PRP28P23394 EMC3YKL207W 762 nt7.55□□□□□ -1.2
PRP28P23394 MRS4YKR052C 915 nt7.55□□□□□ -1.2
PRP28P23394 GAS1YMR307W 1680 nt7.54□□□□□ -1.2
PRP28P23394 PUS5YLR165C 765 nt7.54□□□□□ -1.2
PRP28P23394 CDD1YLR245C 429 nt7.54□□□□□ -1.2
PRP28P23394 NDE1YMR145C 1683 nt7.54□□□□□ -1.2
PRP28P23394 ESS1YJR017C 513 nt7.53□□□□□ -1.2
PRP28P23394 UBP13YBL067C 2244 nt7.53□□□□□ -1.2
PRP28P23394 IGD1YFR017C 588 nt7.52□□□□□ -1.21
PRP28P23394 tS(GCU)LtS(GCU)L 80 nt7.52□□□□□ -1.21
PRP28P23394 YBR232CYBR232C 360 nt7.52□□□□□ -1.21
PRP28P23394 CCR4YAL021C 2514 nt7.52□□□□□ -1.21
PRP28P23394 PTC6YCR079W 1329 nt7.51□□□□□ -1.21
PRP28P23394 PFS2YNL317W 1398 nt7.5□□□□□ -1.21
PRP28P23394 LYS20YDL182W 1287 nt7.5□□□□□ -1.21
PRP28P23394 REC114YMR133W 1287 nt7.5□□□□□ -1.21
PRP28P23394 SDS24YBR214W 1584 nt7.5□□□□□ -1.21
PRP28P23394 BNS1YGR230W 414 nt7.49□□□□□ -1.21
PRP28P23394 YKR012CYKR012C 378 nt7.49□□□□□ -1.21
PRP28P23394 TMS1YDR105C 1422 nt7.49□□□□□ -1.21
PRP28P23394 YLR072WYLR072W 2082 nt7.48□□□□□ -1.21
PRP28P23394 PMA2YPL036W 2844 nt7.48□□□□□ -1.21
PRP28P23394 KDX1YKL161C 1302 nt7.48□□□□□ -1.21
PRP28P23394 YMR210WYMR210W 1350 nt7.47□□□□□ -1.21
PRP28P23394 VBA3YCL069W 1377 nt7.46□□□□□ -1.21
PRP28P23394 FHN1YGR131W 525 nt7.46□□□□□ -1.22
PRP28P23394 PHB2YGR231C 933 nt7.46□□□□□ -1.22
PRP28P23394 RSM7YJR113C 744 nt7.46□□□□□ -1.22
PRP28P23394 FRT1YOR324C 1809 nt7.45□□□□□ -1.22
PRP28P23394 AIM34YMR003W 597 nt7.45□□□□□ -1.22
PRP28P23394 ADH3YMR083W 1128 nt7.45□□□□□ -1.22
PRP28P23394 DAL7YIR031C 1665 nt7.44□□□□□ -1.22
PRP28P23394 ENO1YGR254W 1314 nt7.44□□□□□ -1.22
PRP28P23394 BEM1YBR200W 1656 nt7.44□□□□□ -1.22
PRP28P23394 snR86snR86 1004 nt7.43□□□□□ -1.22
PRP28P23394 BIM1YER016W 1035 nt7.43□□□□□ -1.22
PRP28P23394 FLX1YIL134W 936 nt7.43□□□□□ -1.22
PRP28P23394 YIR035CYIR035C 765 nt7.43□□□□□ -1.22
PRP28P23394 HSV2YGR223C 1347 nt7.43□□□□□ -1.22
PRP28P23394 DIA4YHR011W 1341 nt7.43□□□□□ -1.22
PRP28P23394 YJL009WYJL009W 327 nt7.42□□□□□ -1.22
PRP28P23394 ITR1YDR497C 1755 nt7.41□□□□□ -1.22
PRP28P23394 SLM3YDL033C 1254 nt7.41□□□□□ -1.22
PRP28P23394 YFR020WYFR020W 699 nt7.41□□□□□ -1.22
PRP28P23394 YHM2YMR241W 945 nt7.41□□□□□ -1.22
PRP28P23394 LEA1YPL213W 717 nt7.41□□□□□ -1.22
PRP28P23394 tA(AGC)DtA(AGC)D 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)FtA(AGC)F 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)GtA(AGC)G 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)HtA(AGC)H 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)JtA(AGC)J 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)K1tA(AGC)K1 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)K2tA(AGC)K2 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)LtA(AGC)L 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)M1tA(AGC)M1 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)M2tA(AGC)M2 73 nt7.4□□□□□ -1.22
PRP28P23394 tA(AGC)PtA(AGC)P 73 nt7.4□□□□□ -1.22
PRP28P23394 MOB1YIL106W 945 nt7.4□□□□□ -1.22
PRP28P23394 SRP102YKL154W 735 nt7.4□□□□□ -1.22
PRP28P23394 ATG17YLR423C 1254 nt7.4□□□□□ -1.22
PRP28P23394 CMK2YOL016C 1344 nt7.4□□□□□ -1.22
PRP28P23394 TOP3YLR234W 1971 nt7.39□□□□□ -1.23
PRP28P23394 CRN1YLR429W 1956 nt7.39□□□□□ -1.23
PRP28P23394 CYC3YAL039C 810 nt7.39□□□□□ -1.23
PRP28P23394 IPL1YPL209C 1104 nt7.39□□□□□ -1.23
PRP28P23394 BUB2YMR055C 921 nt7.38□□□□□ -1.23
PRP28P23394 YNL165WYNL165W 1221 nt7.38□□□□□ -1.23
PRP28P23394 YBR056WYBR056W 1506 nt7.37□□□□□ -1.23
PRP28P23394 SMC5YOL034W 3282 nt7.37□□□□□ -1.23
PRP28P23394 MDH2YOL126C 1134 nt7.37□□□□□ -1.23
PRP28P23394 ABP1YCR088W 1779 nt7.36□□□□□ -1.23
PRP28P23394 GGC1YDL198C 903 nt7.36□□□□□ -1.23
PRP28P23394 HIS3YOR202W 663 nt7.36□□□□□ -1.23
PRP28P23394 YLR460CYLR460C 1131 nt7.35□□□□□ -1.23
PRP28P23394 SEN2YLR105C 1134 nt7.34□□□□□ -1.23
PRP28P23394 PRC1YMR297W 1599 nt7.33□□□□□ -1.24
PRP28P23394 YJR149WYJR149W 1215 nt7.33□□□□□ -1.24
PRP28P23394 CTF3YLR381W 2202 nt7.33□□□□□ -1.24
PRP28P23394 HAL5YJL165C 2568 nt7.33□□□□□ -1.24
PRP28P23394 CHS7YHR142W 951 nt7.32□□□□□ -1.24
PRP28P23394 NAP1YKR048C 1254 nt7.32□□□□□ -1.24
PRP28P23394 DPH5YLR172C 903 nt7.32□□□□□ -1.24
PRP28P23394 YLR280CYLR280C 351 nt7.32□□□□□ -1.24
PRP28P23394 YCR025CYCR025C 411 nt7.31□□□□□ -1.24
PRP28P23394 YJL064WYJL064W 396 nt7.31□□□□□ -1.24
PRP28P23394 PAU19YMR325W 375 nt7.31□□□□□ -1.24
PRP28P23394 NDE2YDL085W 1638 nt7.3□□□□□ -1.24
PRP28P23394 AFG2YLR397C 2343 nt7.3□□□□□ -1.24
PRP28P23394 PMT7YDR307W 1989 nt7.3□□□□□ -1.24
PRP28P23394 ERO1YML130C 1692 nt7.3□□□□□ -1.24
PRP28P23394 TIF3YPR163C 1311 nt7.29□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 10.2 ms