Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl3P10855 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccl3P10855 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl3P10855 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl3P10855 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl3P10855 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl3P10855 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccl3P10855 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.3■■□□□ 1
Ccl3P10855 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.3■■□□□ 1
Ccl3P10855 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccl3P10855 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccl3P10855 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.29■■□□□ 1
Ccl3P10855 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl3P10855 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccl3P10855 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl3P10855 Mir3960-201ENSMUST00000198213 73 ntBASIC21.27■■□□□ 1
Ccl3P10855 Gm16437-201ENSMUST00000025669 507 ntBASIC21.27■■□□□ 1
Ccl3P10855 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
Ccl3P10855 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.26■□□□□ 0.99
Ccl3P10855 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccl3P10855 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl3P10855 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl3P10855 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.25■□□□□ 0.99
Ccl3P10855 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.24■□□□□ 0.99
Ccl3P10855 Gm12366-201ENSMUST00000121722 873 ntBASIC21.24■□□□□ 0.99
Ccl3P10855 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.24■□□□□ 0.99
Ccl3P10855 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.24■□□□□ 0.99
Ccl3P10855 Gm5786-201ENSMUST00000085368 882 ntBASIC21.24■□□□□ 0.99
Ccl3P10855 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl3P10855 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl3P10855 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.23■□□□□ 0.99
Ccl3P10855 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl3P10855 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl3P10855 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl3P10855 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccl3P10855 Gm45364-201ENSMUST00000210883 159 ntBASIC21.22■□□□□ 0.99
Ccl3P10855 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccl3P10855 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccl3P10855 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccl3P10855 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccl3P10855 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccl3P10855 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccl3P10855 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccl3P10855 Gm37136-201ENSMUST00000194368 194 ntBASIC21.21■□□□□ 0.99
Ccl3P10855 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccl3P10855 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccl3P10855 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccl3P10855 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.19■□□□□ 0.98
Ccl3P10855 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccl3P10855 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl3P10855 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl3P10855 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccl3P10855 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ccl3P10855 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccl3P10855 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccl3P10855 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccl3P10855 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccl3P10855 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccl3P10855 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccl3P10855 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccl3P10855 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccl3P10855 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccl3P10855 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl3P10855 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl3P10855 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl3P10855 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl3P10855 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.13■□□□□ 0.97
Ccl3P10855 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.12■□□□□ 0.97
Ccl3P10855 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccl3P10855 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl3P10855 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl3P10855 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl3P10855 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccl3P10855 Gm27502-201ENSMUST00000183495 199 ntBASIC21.1■□□□□ 0.97
Ccl3P10855 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.1■□□□□ 0.97
Ccl3P10855 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccl3P10855 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl3P10855 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl3P10855 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl3P10855 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl3P10855 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ccl3P10855 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.07■□□□□ 0.96
Ccl3P10855 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Ccl3P10855 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccl3P10855 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl3P10855 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl3P10855 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.06■□□□□ 0.96
Ccl3P10855 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl3P10855 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccl3P10855 Gm7332-201ENSMUST00000118351 454 ntBASIC21.05■□□□□ 0.96
Ccl3P10855 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.05■□□□□ 0.96
Ccl3P10855 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl3P10855 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl3P10855 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl3P10855 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl3P10855 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl3P10855 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl3P10855 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl3P10855 Zxda-201ENSMUST00000117281 2621 ntBASIC21.04■□□□□ 0.96
Ccl3P10855 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms