Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
NclP09405 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
NclP09405 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC35.22■■■■□ 3.23
NclP09405 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC35.22■■■■□ 3.23
NclP09405 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
NclP09405 Gm6311-201ENSMUST00000073790 878 ntBASIC35.21■■■■□ 3.23
NclP09405 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
NclP09405 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
NclP09405 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
NclP09405 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
NclP09405 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC35.18■■■■□ 3.22
NclP09405 Amer2-203ENSMUST00000225247 2662 ntBASIC35.18■■■■□ 3.22
NclP09405 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC35.16■■■■□ 3.22
NclP09405 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC35.16■■■■□ 3.22
NclP09405 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC35.15■■■■□ 3.22
NclP09405 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC35.15■■■■□ 3.22
NclP09405 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC35.15■■■■□ 3.22
NclP09405 Gm11175-201ENSMUST00000116172 543 ntBASIC35.14■■■■□ 3.22
NclP09405 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC35.13■■■■□ 3.21
NclP09405 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC35.13■■■■□ 3.21
NclP09405 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
NclP09405 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
NclP09405 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
NclP09405 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
NclP09405 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC35.08■■■■□ 3.21
NclP09405 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC35.08■■■■□ 3.21
NclP09405 Mir6538-201ENSMUST00000183713 110 ntBASIC35.08■■■■□ 3.21
NclP09405 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC35.07■■■■□ 3.21
NclP09405 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
NclP09405 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC35.07■■■■□ 3.2
NclP09405 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC35.06■■■■□ 3.2
NclP09405 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC35.06■■■■□ 3.2
NclP09405 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
NclP09405 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC35.05■■■■□ 3.2
NclP09405 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
NclP09405 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
NclP09405 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
NclP09405 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC35.04■■■■□ 3.2
NclP09405 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
NclP09405 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC35.04■■■■□ 3.2
NclP09405 Gm37136-201ENSMUST00000194368 194 ntBASIC35.03■■■■□ 3.2
NclP09405 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
NclP09405 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
NclP09405 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
NclP09405 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC35■■■■□ 3.19
NclP09405 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
NclP09405 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
NclP09405 Gm4799-201ENSMUST00000095396 657 ntBASIC34.98■■■■□ 3.19
NclP09405 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
NclP09405 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
NclP09405 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
NclP09405 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
NclP09405 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
NclP09405 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
NclP09405 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
NclP09405 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
NclP09405 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
NclP09405 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC34.91■■■■□ 3.18
NclP09405 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC34.91■■■■□ 3.18
NclP09405 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
NclP09405 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC34.9■■■■□ 3.18
NclP09405 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
NclP09405 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
NclP09405 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
NclP09405 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC34.89■■■■□ 3.18
NclP09405 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
NclP09405 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
NclP09405 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC34.87■■■■□ 3.17
NclP09405 AC154454.1-201ENSMUST00000225253 216 ntBASIC34.87■■■■□ 3.17
NclP09405 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
NclP09405 Mir3960-201ENSMUST00000198213 73 ntBASIC34.85■■■■□ 3.17
NclP09405 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
NclP09405 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
NclP09405 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
NclP09405 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
NclP09405 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
NclP09405 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
NclP09405 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC34.81■■■■□ 3.16
NclP09405 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC34.81■■■■□ 3.16
NclP09405 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
NclP09405 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
NclP09405 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
NclP09405 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
NclP09405 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
NclP09405 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
NclP09405 Pkd1-207ENSMUST00000228550 1050 ntBASIC34.78■■■■□ 3.16
NclP09405 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
NclP09405 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
NclP09405 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
NclP09405 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
NclP09405 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
NclP09405 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
NclP09405 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC34.76■■■■□ 3.15
NclP09405 Gm13889-201ENSMUST00000099689 1386 ntBASIC34.75■■■■□ 3.15
NclP09405 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
NclP09405 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
NclP09405 Scarna2-201ENSMUST00000157560 414 ntBASIC34.74■■■■□ 3.15
NclP09405 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC34.74■■■■□ 3.15
NclP09405 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
NclP09405 Gm45364-201ENSMUST00000210883 159 ntBASIC34.73■■■■□ 3.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms