Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtaP09225 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtaP09225 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LtaP09225 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtaP09225 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LtaP09225 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.24■□□□□ 0.67
LtaP09225 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LtaP09225 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtaP09225 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LtaP09225 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LtaP09225 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LtaP09225 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LtaP09225 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.22■□□□□ 0.67
LtaP09225 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LtaP09225 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LtaP09225 Particl-201ENSMUST00000205370 1560 ntBASIC19.2■□□□□ 0.66
LtaP09225 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LtaP09225 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
LtaP09225 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.2■□□□□ 0.66
LtaP09225 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LtaP09225 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LtaP09225 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
LtaP09225 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.19■□□□□ 0.66
LtaP09225 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LtaP09225 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.18■□□□□ 0.66
LtaP09225 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.18■□□□□ 0.66
LtaP09225 Gm11599-201ENSMUST00000118720 878 ntBASIC19.17■□□□□ 0.66
LtaP09225 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LtaP09225 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LtaP09225 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
LtaP09225 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.16■□□□□ 0.66
LtaP09225 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.16■□□□□ 0.66
LtaP09225 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LtaP09225 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LtaP09225 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LtaP09225 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.15■□□□□ 0.66
LtaP09225 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.15■□□□□ 0.66
LtaP09225 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LtaP09225 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LtaP09225 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtaP09225 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.13■□□□□ 0.65
LtaP09225 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LtaP09225 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LtaP09225 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtaP09225 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LtaP09225 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.11■□□□□ 0.65
LtaP09225 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.11■□□□□ 0.65
LtaP09225 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LtaP09225 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LtaP09225 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
LtaP09225 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LtaP09225 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtaP09225 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtaP09225 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LtaP09225 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LtaP09225 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LtaP09225 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LtaP09225 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.06■□□□□ 0.64
LtaP09225 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LtaP09225 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtaP09225 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtaP09225 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtaP09225 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LtaP09225 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.03■□□□□ 0.64
LtaP09225 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LtaP09225 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LtaP09225 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LtaP09225 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LtaP09225 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LtaP09225 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LtaP09225 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.99■□□□□ 0.63
LtaP09225 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.99■□□□□ 0.63
LtaP09225 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LtaP09225 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LtaP09225 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LtaP09225 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LtaP09225 Gm37136-201ENSMUST00000194368 194 ntBASIC18.96■□□□□ 0.63
LtaP09225 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LtaP09225 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LtaP09225 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LtaP09225 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LtaP09225 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LtaP09225 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LtaP09225 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LtaP09225 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LtaP09225 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LtaP09225 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LtaP09225 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.94■□□□□ 0.62
LtaP09225 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.94■□□□□ 0.62
LtaP09225 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtaP09225 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LtaP09225 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtaP09225 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.92■□□□□ 0.62
LtaP09225 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtaP09225 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtaP09225 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LtaP09225 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.92■□□□□ 0.62
LtaP09225 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtaP09225 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.92■□□□□ 0.62
LtaP09225 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 233.2 ms