Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.28■□□□□ 0.68
P04940 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04940 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04940 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04940 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.27■□□□□ 0.68
P04940 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04940 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.27■□□□□ 0.68
P04940 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04940 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P04940 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
P04940 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04940 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04940 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
P04940 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.24■□□□□ 0.67
P04940 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04940 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04940 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04940 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
P04940 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P04940 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
P04940 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
P04940 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P04940 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P04940 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
P04940 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P04940 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04940 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.22■□□□□ 0.67
P04940 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
P04940 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P04940 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
P04940 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
P04940 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.21■□□□□ 0.67
P04940 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.21■□□□□ 0.67
P04940 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P04940 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.19■□□□□ 0.66
P04940 Particl-201ENSMUST00000205370 1560 ntBASIC19.19■□□□□ 0.66
P04940 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.19■□□□□ 0.66
P04940 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.19■□□□□ 0.66
P04940 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.19■□□□□ 0.66
P04940 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
P04940 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
P04940 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
P04940 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
P04940 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P04940 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
P04940 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P04940 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P04940 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.17■□□□□ 0.66
P04940 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P04940 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P04940 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
P04940 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.16■□□□□ 0.66
P04940 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.16■□□□□ 0.66
P04940 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.15■□□□□ 0.66
P04940 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P04940 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
P04940 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04940 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P04940 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04940 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P04940 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.13■□□□□ 0.65
P04940 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P04940 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P04940 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04940 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04940 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
P04940 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P04940 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P04940 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.09■□□□□ 0.65
P04940 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04940 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
P04940 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.08■□□□□ 0.65
P04940 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
P04940 Gm6821-201ENSMUST00000107540 542 ntBASIC19.08■□□□□ 0.64
P04940 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P04940 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P04940 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.07■□□□□ 0.64
P04940 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P04940 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P04940 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P04940 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.06■□□□□ 0.64
P04940 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P04940 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P04940 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
P04940 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04940 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04940 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04940 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P04940 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.05■□□□□ 0.64
P04940 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
P04940 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P04940 Gm8503-201ENSMUST00000118131 455 ntBASIC19.04■□□□□ 0.64
P04940 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.04■□□□□ 0.64
P04940 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P04940 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P04940 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P04940 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P04940 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P04940 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P04940 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms