Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PrnpP04925 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PrnpP04925 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PrnpP04925 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PrnpP04925 Gm11687-201ENSMUST00000118911 886 ntBASIC24.97■■□□□ 1.59
PrnpP04925 Gm9806-201ENSMUST00000051080 552 ntBASIC24.97■■□□□ 1.59
PrnpP04925 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PrnpP04925 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PrnpP04925 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PrnpP04925 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
PrnpP04925 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.96■■□□□ 1.59
PrnpP04925 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.96■■□□□ 1.59
PrnpP04925 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.96■■□□□ 1.59
PrnpP04925 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PrnpP04925 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PrnpP04925 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PrnpP04925 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PrnpP04925 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PrnpP04925 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PrnpP04925 Mir3960-201ENSMUST00000198213 73 ntBASIC24.94■■□□□ 1.58
PrnpP04925 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PrnpP04925 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PrnpP04925 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.92■■□□□ 1.58
PrnpP04925 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PrnpP04925 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.91■■□□□ 1.58
PrnpP04925 Gm37136-201ENSMUST00000194368 194 ntBASIC24.91■■□□□ 1.58
PrnpP04925 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.9■■□□□ 1.58
PrnpP04925 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.9■■□□□ 1.58
PrnpP04925 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PrnpP04925 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PrnpP04925 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.89■■□□□ 1.57
PrnpP04925 Gm16437-201ENSMUST00000025669 507 ntBASIC24.88■■□□□ 1.57
PrnpP04925 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PrnpP04925 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.87■■□□□ 1.57
PrnpP04925 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PrnpP04925 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PrnpP04925 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PrnpP04925 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PrnpP04925 Gm45364-201ENSMUST00000210883 159 ntBASIC24.84■■□□□ 1.57
PrnpP04925 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PrnpP04925 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
PrnpP04925 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.82■■□□□ 1.56
PrnpP04925 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.82■■□□□ 1.56
PrnpP04925 Gm12366-201ENSMUST00000121722 873 ntBASIC24.82■■□□□ 1.56
PrnpP04925 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.82■■□□□ 1.56
PrnpP04925 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.82■■□□□ 1.56
PrnpP04925 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PrnpP04925 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PrnpP04925 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PrnpP04925 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.82■■□□□ 1.56
PrnpP04925 Gm5786-201ENSMUST00000085368 882 ntBASIC24.82■■□□□ 1.56
PrnpP04925 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
PrnpP04925 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PrnpP04925 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PrnpP04925 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.8■■□□□ 1.56
PrnpP04925 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.79■■□□□ 1.56
PrnpP04925 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PrnpP04925 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
PrnpP04925 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PrnpP04925 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PrnpP04925 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.78■■□□□ 1.56
PrnpP04925 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PrnpP04925 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PrnpP04925 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PrnpP04925 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PrnpP04925 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PrnpP04925 Zxda-201ENSMUST00000117281 2621 ntBASIC24.76■■□□□ 1.55
PrnpP04925 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PrnpP04925 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.75■■□□□ 1.55
PrnpP04925 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PrnpP04925 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PrnpP04925 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PrnpP04925 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.73■■□□□ 1.55
PrnpP04925 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PrnpP04925 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
PrnpP04925 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.72■■□□□ 1.55
PrnpP04925 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.72■■□□□ 1.55
PrnpP04925 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PrnpP04925 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
PrnpP04925 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PrnpP04925 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
PrnpP04925 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.7■■□□□ 1.54
PrnpP04925 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PrnpP04925 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.7■■□□□ 1.54
PrnpP04925 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.69■■□□□ 1.54
PrnpP04925 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PrnpP04925 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PrnpP04925 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PrnpP04925 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.68■■□□□ 1.54
PrnpP04925 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PrnpP04925 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
PrnpP04925 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PrnpP04925 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PrnpP04925 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PrnpP04925 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PrnpP04925 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
PrnpP04925 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PrnpP04925 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PrnpP04925 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PrnpP04925 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms