Protein–RNA interactions for Protein: P01797

Ig heavy chain V-III region U61, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01797 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
P01797 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P01797 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.46■□□□□ 0.71
P01797 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
P01797 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01797 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P01797 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P01797 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01797 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
P01797 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P01797 Gm11599-201ENSMUST00000118720 878 ntBASIC19.42■□□□□ 0.7
P01797 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.42■□□□□ 0.7
P01797 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P01797 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01797 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
P01797 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01797 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
P01797 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01797 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P01797 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
P01797 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01797 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.4■□□□□ 0.7
P01797 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.4■□□□□ 0.7
P01797 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.4■□□□□ 0.7
P01797 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.4■□□□□ 0.7
P01797 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.39■□□□□ 0.7
P01797 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P01797 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01797 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.38■□□□□ 0.69
P01797 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01797 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P01797 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
P01797 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01797 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P01797 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
P01797 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
P01797 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01797 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.36■□□□□ 0.69
P01797 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01797 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01797 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
P01797 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01797 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01797 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01797 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01797 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.34■□□□□ 0.69
P01797 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01797 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01797 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01797 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
P01797 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
P01797 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
P01797 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.32■□□□□ 0.68
P01797 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P01797 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01797 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01797 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.32■□□□□ 0.68
P01797 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01797 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.31■□□□□ 0.68
P01797 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01797 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
P01797 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P01797 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01797 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.3■□□□□ 0.68
P01797 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P01797 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01797 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01797 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01797 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01797 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P01797 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
P01797 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
P01797 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01797 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01797 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
P01797 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.27■□□□□ 0.68
P01797 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
P01797 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01797 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01797 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
P01797 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P01797 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P01797 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.24■□□□□ 0.67
P01797 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P01797 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01797 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
P01797 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.24■□□□□ 0.67
P01797 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01797 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01797 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01797 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.23■□□□□ 0.67
P01797 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
P01797 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.21■□□□□ 0.67
P01797 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P01797 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P01797 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
P01797 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01797 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
P01797 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.2■□□□□ 0.66
P01797 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms