Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Igh-VJ558P01758 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igh-VJ558P01758 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.6■□□□□ 0.89
Igh-VJ558P01758 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Igh-VJ558P01758 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igh-VJ558P01758 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igh-VJ558P01758 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.58■□□□□ 0.89
Igh-VJ558P01758 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Igh-VJ558P01758 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Igh-VJ558P01758 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Igh-VJ558P01758 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igh-VJ558P01758 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igh-VJ558P01758 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.55■□□□□ 0.88
Igh-VJ558P01758 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Igh-VJ558P01758 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.54■□□□□ 0.88
Igh-VJ558P01758 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igh-VJ558P01758 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igh-VJ558P01758 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igh-VJ558P01758 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Igh-VJ558P01758 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igh-VJ558P01758 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Igh-VJ558P01758 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Igh-VJ558P01758 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igh-VJ558P01758 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igh-VJ558P01758 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igh-VJ558P01758 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Nkain2-201ENSMUST00000092602 558 ntBASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igh-VJ558P01758 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igh-VJ558P01758 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igh-VJ558P01758 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igh-VJ558P01758 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igh-VJ558P01758 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igh-VJ558P01758 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Igh-VJ558P01758 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Igh-VJ558P01758 Particl-201ENSMUST00000205370 1560 ntBASIC20.42■□□□□ 0.86
Igh-VJ558P01758 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Igh-VJ558P01758 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igh-VJ558P01758 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igh-VJ558P01758 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.41■□□□□ 0.86
Igh-VJ558P01758 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Igh-VJ558P01758 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Igh-VJ558P01758 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igh-VJ558P01758 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igh-VJ558P01758 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igh-VJ558P01758 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Igh-VJ558P01758 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.38■□□□□ 0.85
Igh-VJ558P01758 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.38■□□□□ 0.85
Igh-VJ558P01758 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igh-VJ558P01758 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.37■□□□□ 0.85
Igh-VJ558P01758 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igh-VJ558P01758 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igh-VJ558P01758 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.35■□□□□ 0.85
Igh-VJ558P01758 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Igh-VJ558P01758 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igh-VJ558P01758 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igh-VJ558P01758 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igh-VJ558P01758 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igh-VJ558P01758 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Igh-VJ558P01758 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igh-VJ558P01758 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Igh-VJ558P01758 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Igh-VJ558P01758 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.33■□□□□ 0.85
Igh-VJ558P01758 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igh-VJ558P01758 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igh-VJ558P01758 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.32■□□□□ 0.84
Igh-VJ558P01758 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igh-VJ558P01758 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms