Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Igh-VJ558P01758 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igh-VJ558P01758 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.6■□□□□ 0.89
Igh-VJ558P01758 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Igh-VJ558P01758 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igh-VJ558P01758 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igh-VJ558P01758 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.58■□□□□ 0.89
Igh-VJ558P01758 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Igh-VJ558P01758 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Igh-VJ558P01758 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igh-VJ558P01758 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Igh-VJ558P01758 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igh-VJ558P01758 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igh-VJ558P01758 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.55■□□□□ 0.88
Igh-VJ558P01758 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Igh-VJ558P01758 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.54■□□□□ 0.88
Igh-VJ558P01758 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igh-VJ558P01758 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igh-VJ558P01758 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igh-VJ558P01758 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Igh-VJ558P01758 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igh-VJ558P01758 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Igh-VJ558P01758 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Igh-VJ558P01758 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igh-VJ558P01758 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.48■□□□□ 0.87
Igh-VJ558P01758 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igh-VJ558P01758 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igh-VJ558P01758 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Nkain2-201ENSMUST00000092602 558 ntBASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igh-VJ558P01758 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igh-VJ558P01758 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igh-VJ558P01758 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igh-VJ558P01758 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Igh-VJ558P01758 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igh-VJ558P01758 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igh-VJ558P01758 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Igh-VJ558P01758 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Igh-VJ558P01758 Particl-201ENSMUST00000205370 1560 ntBASIC20.42■□□□□ 0.86
Igh-VJ558P01758 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Igh-VJ558P01758 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igh-VJ558P01758 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igh-VJ558P01758 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.41■□□□□ 0.86
Igh-VJ558P01758 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Igh-VJ558P01758 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Igh-VJ558P01758 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Igh-VJ558P01758 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igh-VJ558P01758 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igh-VJ558P01758 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igh-VJ558P01758 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Igh-VJ558P01758 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.38■□□□□ 0.85
Igh-VJ558P01758 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.38■□□□□ 0.85
Igh-VJ558P01758 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igh-VJ558P01758 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.37■□□□□ 0.85
Igh-VJ558P01758 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igh-VJ558P01758 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igh-VJ558P01758 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igh-VJ558P01758 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.35■□□□□ 0.85
Igh-VJ558P01758 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Igh-VJ558P01758 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igh-VJ558P01758 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igh-VJ558P01758 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igh-VJ558P01758 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igh-VJ558P01758 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Igh-VJ558P01758 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igh-VJ558P01758 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Igh-VJ558P01758 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Igh-VJ558P01758 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.33■□□□□ 0.85
Igh-VJ558P01758 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igh-VJ558P01758 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igh-VJ558P01758 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.32■□□□□ 0.84
Igh-VJ558P01758 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igh-VJ558P01758 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms