Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn1O88551 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cldn1O88551 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn1O88551 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn1O88551 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cldn1O88551 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn1O88551 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn1O88551 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn1O88551 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn1O88551 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Cldn1O88551 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn1O88551 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn1O88551 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.11■□□□□ 0.81
Cldn1O88551 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn1O88551 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.11■□□□□ 0.81
Cldn1O88551 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn1O88551 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cldn1O88551 Gm15039-201ENSMUST00000118914 875 ntBASIC20.1■□□□□ 0.81
Cldn1O88551 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.1■□□□□ 0.81
Cldn1O88551 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn1O88551 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cldn1O88551 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn1O88551 Gm27502-201ENSMUST00000183495 199 ntBASIC20.09■□□□□ 0.81
Cldn1O88551 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Cldn1O88551 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn1O88551 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn1O88551 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn1O88551 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn1O88551 Gm7332-201ENSMUST00000118351 454 ntBASIC20.07■□□□□ 0.8
Cldn1O88551 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.07■□□□□ 0.8
Cldn1O88551 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.07■□□□□ 0.8
Cldn1O88551 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.07■□□□□ 0.8
Cldn1O88551 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn1O88551 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.06■□□□□ 0.8
Cldn1O88551 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.06■□□□□ 0.8
Cldn1O88551 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn1O88551 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn1O88551 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn1O88551 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn1O88551 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn1O88551 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn1O88551 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn1O88551 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn1O88551 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn1O88551 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Cldn1O88551 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn1O88551 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cldn1O88551 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn1O88551 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn1O88551 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn1O88551 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn1O88551 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cldn1O88551 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn1O88551 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn1O88551 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn1O88551 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.97■□□□□ 0.79
Cldn1O88551 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.97■□□□□ 0.79
Cldn1O88551 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn1O88551 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn1O88551 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn1O88551 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn1O88551 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn1O88551 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn1O88551 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.96■□□□□ 0.79
Cldn1O88551 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn1O88551 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.96■□□□□ 0.79
Cldn1O88551 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn1O88551 Mir3960-201ENSMUST00000198213 73 ntBASIC19.95■□□□□ 0.78
Cldn1O88551 Gm45364-201ENSMUST00000210883 159 ntBASIC19.95■□□□□ 0.78
Cldn1O88551 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.95■□□□□ 0.78
Cldn1O88551 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn1O88551 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn1O88551 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Cldn1O88551 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn1O88551 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn1O88551 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.93■□□□□ 0.78
Cldn1O88551 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn1O88551 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn1O88551 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn1O88551 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cldn1O88551 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn1O88551 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cldn1O88551 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cldn1O88551 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn1O88551 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn1O88551 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn1O88551 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn1O88551 Gm22567-201ENSMUST00000175542 342 ntBASIC19.91■□□□□ 0.78
Cldn1O88551 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn1O88551 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn1O88551 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn1O88551 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.89■□□□□ 0.77
Cldn1O88551 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn1O88551 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn1O88551 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn1O88551 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.87■□□□□ 0.77
Cldn1O88551 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn1O88551 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn1O88551 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.87■□□□□ 0.77
Cldn1O88551 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms