Protein–RNA interactions for Protein: O70584

Nkx2-8, Homeobox protein Nkx-2.8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-8O70584 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-8O70584 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nkx2-8O70584 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-8O70584 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-8O70584 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-8O70584 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-8O70584 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-8O70584 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Nkx2-8O70584 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-8O70584 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-8O70584 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-8O70584 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-8O70584 Gm6821-201ENSMUST00000107540 542 ntBASIC18.93■□□□□ 0.62
Nkx2-8O70584 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Nkx2-8O70584 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-8O70584 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-8O70584 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-8O70584 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-8O70584 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-8O70584 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.91■□□□□ 0.62
Nkx2-8O70584 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-8O70584 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Nkx2-8O70584 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.9■□□□□ 0.62
Nkx2-8O70584 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-8O70584 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-8O70584 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-8O70584 Gm8503-201ENSMUST00000118131 455 ntBASIC18.89■□□□□ 0.61
Nkx2-8O70584 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-8O70584 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.89■□□□□ 0.61
Nkx2-8O70584 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-8O70584 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-8O70584 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-8O70584 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-8O70584 Nkain2-201ENSMUST00000092602 558 ntBASIC18.88■□□□□ 0.61
Nkx2-8O70584 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-8O70584 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-8O70584 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-8O70584 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-8O70584 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-8O70584 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nkx2-8O70584 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-8O70584 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-8O70584 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nkx2-8O70584 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-8O70584 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-8O70584 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-8O70584 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-8O70584 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-8O70584 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-8O70584 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-8O70584 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx2-8O70584 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-8O70584 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-8O70584 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.85■□□□□ 0.61
Nkx2-8O70584 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-8O70584 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nkx2-8O70584 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.84■□□□□ 0.61
Nkx2-8O70584 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.83■□□□□ 0.61
Nkx2-8O70584 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-8O70584 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Nkx2-8O70584 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-8O70584 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-8O70584 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-8O70584 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.82■□□□□ 0.6
Nkx2-8O70584 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-8O70584 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-8O70584 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkx2-8O70584 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-8O70584 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-8O70584 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-8O70584 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-8O70584 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-8O70584 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-8O70584 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-8O70584 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-8O70584 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx2-8O70584 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkx2-8O70584 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkx2-8O70584 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-8O70584 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-8O70584 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-8O70584 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-8O70584 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-8O70584 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-8O70584 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-8O70584 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.76■□□□□ 0.59
Nkx2-8O70584 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nkx2-8O70584 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-8O70584 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-8O70584 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
Nkx2-8O70584 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.75■□□□□ 0.59
Nkx2-8O70584 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-8O70584 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-8O70584 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-8O70584 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-8O70584 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-8O70584 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.74■□□□□ 0.59
Nkx2-8O70584 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-8O70584 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-8O70584 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms