Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.52■□□□□ 0.56
Pde6dO55057 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6dO55057 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.52■□□□□ 0.56
Pde6dO55057 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pde6dO55057 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pde6dO55057 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.52■□□□□ 0.55
Pde6dO55057 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pde6dO55057 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.51■□□□□ 0.55
Pde6dO55057 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pde6dO55057 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pde6dO55057 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pde6dO55057 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pde6dO55057 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pde6dO55057 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6dO55057 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6dO55057 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6dO55057 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pde6dO55057 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6dO55057 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.48■□□□□ 0.55
Pde6dO55057 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pde6dO55057 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pde6dO55057 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6dO55057 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6dO55057 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pde6dO55057 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6dO55057 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Pde6dO55057 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6dO55057 Gm25262-201ENSMUST00000174934 133 ntBASIC18.45■□□□□ 0.54
Pde6dO55057 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6dO55057 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6dO55057 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6dO55057 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6dO55057 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pde6dO55057 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pde6dO55057 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pde6dO55057 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pde6dO55057 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6dO55057 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6dO55057 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6dO55057 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6dO55057 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6dO55057 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pde6dO55057 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pde6dO55057 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pde6dO55057 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6dO55057 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6dO55057 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6dO55057 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6dO55057 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6dO55057 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6dO55057 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6dO55057 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Pde6dO55057 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6dO55057 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6dO55057 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6dO55057 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6dO55057 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pde6dO55057 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6dO55057 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6dO55057 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.39■□□□□ 0.53
Pde6dO55057 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Pde6dO55057 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Pde6dO55057 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6dO55057 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pde6dO55057 Gm27322-201ENSMUST00000184007 104 ntBASIC18.38■□□□□ 0.53
Pde6dO55057 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6dO55057 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6dO55057 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pde6dO55057 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6dO55057 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pde6dO55057 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6dO55057 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6dO55057 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6dO55057 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6dO55057 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Pde6dO55057 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6dO55057 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6dO55057 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pde6dO55057 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6dO55057 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6dO55057 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6dO55057 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6dO55057 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6dO55057 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6dO55057 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pde6dO55057 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pde6dO55057 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6dO55057 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.35■□□□□ 0.53
Pde6dO55057 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6dO55057 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6dO55057 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.34■□□□□ 0.53
Pde6dO55057 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms