Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
Kcnu1O54982 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kcnu1O54982 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kcnu1O54982 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Kcnu1O54982 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.25■■□□□ 1.63
Kcnu1O54982 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Kcnu1O54982 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Kcnu1O54982 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Kcnu1O54982 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.24■■□□□ 1.63
Kcnu1O54982 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Kcnu1O54982 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Kcnu1O54982 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Kcnu1O54982 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.23■■□□□ 1.63
Kcnu1O54982 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Kcnu1O54982 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Kcnu1O54982 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Kcnu1O54982 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Kcnu1O54982 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Kcnu1O54982 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Kcnu1O54982 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Kcnu1O54982 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Kcnu1O54982 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
Kcnu1O54982 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Kcnu1O54982 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Kcnu1O54982 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Kcnu1O54982 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Kcnu1O54982 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Kcnu1O54982 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Kcnu1O54982 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Kcnu1O54982 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.15■■□□□ 1.62
Kcnu1O54982 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Kcnu1O54982 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Kcnu1O54982 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Kcnu1O54982 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Kcnu1O54982 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Kcnu1O54982 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Kcnu1O54982 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Kcnu1O54982 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Kcnu1O54982 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Kcnu1O54982 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Kcnu1O54982 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Kcnu1O54982 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnu1O54982 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnu1O54982 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnu1O54982 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kcnu1O54982 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Kcnu1O54982 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Kcnu1O54982 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.08■■□□□ 1.61
Kcnu1O54982 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.61
Kcnu1O54982 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.08■■□□□ 1.61
Kcnu1O54982 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Kcnu1O54982 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Kcnu1O54982 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
Kcnu1O54982 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Kcnu1O54982 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Kcnu1O54982 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Kcnu1O54982 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Kcnu1O54982 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.05■■□□□ 1.6
Kcnu1O54982 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.05■■□□□ 1.6
Kcnu1O54982 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Kcnu1O54982 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Kcnu1O54982 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Kcnu1O54982 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Kcnu1O54982 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.02■■□□□ 1.6
Kcnu1O54982 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Kcnu1O54982 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Kcnu1O54982 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.01■■□□□ 1.59
Kcnu1O54982 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Kcnu1O54982 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25■■□□□ 1.59
Kcnu1O54982 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25■■□□□ 1.59
Kcnu1O54982 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Kcnu1O54982 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
Kcnu1O54982 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Kcnu1O54982 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Kcnu1O54982 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
Kcnu1O54982 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Kcnu1O54982 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Kcnu1O54982 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kcnu1O54982 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Kcnu1O54982 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Kcnu1O54982 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kcnu1O54982 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.97■■□□□ 1.59
Kcnu1O54982 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kcnu1O54982 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Kcnu1O54982 Nkain2-201ENSMUST00000092602 558 ntBASIC24.96■■□□□ 1.59
Kcnu1O54982 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Kcnu1O54982 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Kcnu1O54982 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Kcnu1O54982 Particl-201ENSMUST00000205370 1560 ntBASIC24.94■■□□□ 1.58
Kcnu1O54982 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Kcnu1O54982 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Kcnu1O54982 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Kcnu1O54982 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.93■■□□□ 1.58
Kcnu1O54982 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Kcnu1O54982 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Kcnu1O54982 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Kcnu1O54982 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Kcnu1O54982 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Kcnu1O54982 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Kcnu1O54982 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms