Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.32■■□□□ 1
Matn3O35701 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Matn3O35701 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Matn3O35701 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.32■■□□□ 1
Matn3O35701 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Matn3O35701 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Matn3O35701 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Matn3O35701 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.31■■□□□ 1
Matn3O35701 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.3■■□□□ 1
Matn3O35701 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Matn3O35701 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Matn3O35701 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Matn3O35701 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Matn3O35701 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Matn3O35701 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Matn3O35701 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.29■■□□□ 1
Matn3O35701 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Matn3O35701 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Matn3O35701 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.27■■□□□ 1
Matn3O35701 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Matn3O35701 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.27■■□□□ 1
Matn3O35701 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Matn3O35701 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Matn3O35701 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Matn3O35701 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Matn3O35701 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Matn3O35701 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Matn3O35701 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Matn3O35701 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Matn3O35701 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Matn3O35701 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Matn3O35701 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Matn3O35701 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Matn3O35701 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Matn3O35701 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Matn3O35701 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Matn3O35701 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Matn3O35701 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.24■□□□□ 0.99
Matn3O35701 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Matn3O35701 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Matn3O35701 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Matn3O35701 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Matn3O35701 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Matn3O35701 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Matn3O35701 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Matn3O35701 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Matn3O35701 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Matn3O35701 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Matn3O35701 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.22■□□□□ 0.99
Matn3O35701 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Matn3O35701 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Matn3O35701 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Matn3O35701 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Matn3O35701 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Matn3O35701 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Matn3O35701 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Matn3O35701 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Matn3O35701 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Matn3O35701 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Matn3O35701 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Matn3O35701 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Matn3O35701 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Matn3O35701 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Matn3O35701 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Matn3O35701 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Matn3O35701 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.2■□□□□ 0.98
Matn3O35701 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Matn3O35701 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Matn3O35701 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Matn3O35701 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Matn3O35701 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Matn3O35701 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Matn3O35701 Peli2-204ENSMUST00000226513 1320 ntBASIC21.18■□□□□ 0.98
Matn3O35701 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Matn3O35701 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Matn3O35701 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Matn3O35701 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.17■□□□□ 0.98
Matn3O35701 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.17■□□□□ 0.98
Matn3O35701 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Matn3O35701 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Matn3O35701 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.17■□□□□ 0.98
Matn3O35701 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Matn3O35701 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Matn3O35701 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Matn3O35701 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Matn3O35701 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.16■□□□□ 0.98
Matn3O35701 Zfp131-205ENSMUST00000223812 663 ntBASIC21.16■□□□□ 0.98
Matn3O35701 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Matn3O35701 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Matn3O35701 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Matn3O35701 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Matn3O35701 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Matn3O35701 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Matn3O35701 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Matn3O35701 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Matn3O35701 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Matn3O35701 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Matn3O35701 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Matn3O35701 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Matn3O35701 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms