Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptch2O35595 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Ptch2O35595 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.29■■□□□ 1.48
Ptch2O35595 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptch2O35595 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch2O35595 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch2O35595 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch2O35595 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch2O35595 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.27■■□□□ 1.48
Ptch2O35595 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.27■■□□□ 1.48
Ptch2O35595 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch2O35595 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch2O35595 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Ptch2O35595 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptch2O35595 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Ptch2O35595 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
Ptch2O35595 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptch2O35595 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Ptch2O35595 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch2O35595 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch2O35595 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch2O35595 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch2O35595 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch2O35595 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch2O35595 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Ptch2O35595 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch2O35595 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.21■■□□□ 1.47
Ptch2O35595 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptch2O35595 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ptch2O35595 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.2■■□□□ 1.47
Ptch2O35595 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptch2O35595 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.2■■□□□ 1.46
Ptch2O35595 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.2■■□□□ 1.46
Ptch2O35595 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptch2O35595 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptch2O35595 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch2O35595 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch2O35595 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Ptch2O35595 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.17■■□□□ 1.46
Ptch2O35595 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch2O35595 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch2O35595 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch2O35595 Scarna2-201ENSMUST00000157560 414 ntBASIC24.16■■□□□ 1.46
Ptch2O35595 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Ptch2O35595 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ptch2O35595 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ptch2O35595 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ptch2O35595 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ptch2O35595 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ptch2O35595 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Ptch2O35595 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.13■■□□□ 1.45
Ptch2O35595 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch2O35595 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch2O35595 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.12■■□□□ 1.45
Ptch2O35595 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch2O35595 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.11■■□□□ 1.45
Ptch2O35595 Gm4799-201ENSMUST00000095396 657 ntBASIC24.11■■□□□ 1.45
Ptch2O35595 Gm37136-201ENSMUST00000194368 194 ntBASIC24.1■■□□□ 1.45
Ptch2O35595 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.1■■□□□ 1.45
Ptch2O35595 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
Ptch2O35595 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ptch2O35595 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.09■■□□□ 1.45
Ptch2O35595 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.08■■□□□ 1.45
Ptch2O35595 Gm45364-201ENSMUST00000210883 159 ntBASIC24.08■■□□□ 1.45
Ptch2O35595 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ptch2O35595 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ptch2O35595 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
Ptch2O35595 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ptch2O35595 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ptch2O35595 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ptch2O35595 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
Ptch2O35595 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.06■■□□□ 1.44
Ptch2O35595 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.06■■□□□ 1.44
Ptch2O35595 Gm16437-201ENSMUST00000025669 507 ntBASIC24.06■■□□□ 1.44
Ptch2O35595 Mir3960-201ENSMUST00000198213 73 ntBASIC24.05■■□□□ 1.44
Ptch2O35595 Gm9806-201ENSMUST00000051080 552 ntBASIC24.05■■□□□ 1.44
Ptch2O35595 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Ptch2O35595 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptch2O35595 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ptch2O35595 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.04■■□□□ 1.44
Ptch2O35595 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptch2O35595 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptch2O35595 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ptch2O35595 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.02■■□□□ 1.44
Ptch2O35595 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptch2O35595 Gm11687-201ENSMUST00000118911 886 ntBASIC24.01■■□□□ 1.43
Ptch2O35595 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Ptch2O35595 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Ptch2O35595 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptch2O35595 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.99■■□□□ 1.43
Ptch2O35595 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptch2O35595 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ptch2O35595 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptch2O35595 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ptch2O35595 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptch2O35595 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ptch2O35595 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ptch2O35595 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ptch2O35595 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptch2O35595 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms