Protein–RNA interactions for Protein: O35427

Crcp, DNA-directed RNA polymerase III subunit RPC9, mousemouse

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrcpO35427 Gm11599-201ENSMUST00000118720 878 ntBASIC28.23■■■□□ 2.11
CrcpO35427 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.23■■■□□ 2.11
CrcpO35427 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CrcpO35427 Particl-201ENSMUST00000205370 1560 ntBASIC28.22■■■□□ 2.11
CrcpO35427 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
CrcpO35427 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CrcpO35427 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CrcpO35427 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
CrcpO35427 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CrcpO35427 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CrcpO35427 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.19■■■□□ 2.1
CrcpO35427 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CrcpO35427 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CrcpO35427 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.16■■■□□ 2.1
CrcpO35427 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
CrcpO35427 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
CrcpO35427 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CrcpO35427 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CrcpO35427 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
CrcpO35427 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
CrcpO35427 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
CrcpO35427 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.13■■■□□ 2.09
CrcpO35427 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
CrcpO35427 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CrcpO35427 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CrcpO35427 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
CrcpO35427 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CrcpO35427 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CrcpO35427 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CrcpO35427 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CrcpO35427 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CrcpO35427 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.06■■■□□ 2.08
CrcpO35427 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CrcpO35427 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CrcpO35427 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.04■■■□□ 2.08
CrcpO35427 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC28.04■■■□□ 2.08
CrcpO35427 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CrcpO35427 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CrcpO35427 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.02■■■□□ 2.08
CrcpO35427 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.01■■■□□ 2.07
CrcpO35427 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.99■■■□□ 2.07
CrcpO35427 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.98■■■□□ 2.07
CrcpO35427 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.96■■■□□ 2.07
CrcpO35427 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CrcpO35427 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
CrcpO35427 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CrcpO35427 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.93■■■□□ 2.06
CrcpO35427 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CrcpO35427 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CrcpO35427 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
CrcpO35427 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CrcpO35427 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
CrcpO35427 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CrcpO35427 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CrcpO35427 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
CrcpO35427 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CrcpO35427 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CrcpO35427 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CrcpO35427 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CrcpO35427 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CrcpO35427 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CrcpO35427 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CrcpO35427 Gm37136-201ENSMUST00000194368 194 ntBASIC27.87■■■□□ 2.05
CrcpO35427 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
CrcpO35427 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CrcpO35427 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
CrcpO35427 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CrcpO35427 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
CrcpO35427 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
CrcpO35427 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CrcpO35427 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CrcpO35427 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CrcpO35427 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CrcpO35427 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CrcpO35427 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.83■■■□□ 2.05
CrcpO35427 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.82■■■□□ 2.04
CrcpO35427 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CrcpO35427 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CrcpO35427 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.8■■■□□ 2.04
CrcpO35427 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CrcpO35427 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.8■■■□□ 2.04
CrcpO35427 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.8■■■□□ 2.04
CrcpO35427 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CrcpO35427 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CrcpO35427 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.79■■■□□ 2.04
CrcpO35427 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CrcpO35427 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.78■■■□□ 2.04
CrcpO35427 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CrcpO35427 Gm4799-201ENSMUST00000095396 657 ntBASIC27.76■■■□□ 2.03
CrcpO35427 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
CrcpO35427 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CrcpO35427 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CrcpO35427 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
CrcpO35427 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.74■■■□□ 2.03
CrcpO35427 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CrcpO35427 Gm6311-201ENSMUST00000073790 878 ntBASIC27.73■■■□□ 2.03
CrcpO35427 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CrcpO35427 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CrcpO35427 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
CrcpO35427 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms