Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pkd1O08852 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pkd1O08852 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pkd1O08852 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pkd1O08852 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.62■□□□□ 0.09
Pkd1O08852 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pkd1O08852 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pkd1O08852 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pkd1O08852 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pkd1O08852 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.6■□□□□ 0.09
Pkd1O08852 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pkd1O08852 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pkd1O08852 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.6■□□□□ 0.09
Pkd1O08852 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pkd1O08852 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pkd1O08852 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pkd1O08852 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pkd1O08852 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pkd1O08852 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.58■□□□□ 0.09
Pkd1O08852 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pkd1O08852 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pkd1O08852 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pkd1O08852 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.58■□□□□ 0.08
Pkd1O08852 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pkd1O08852 Gm6658-202ENSMUST00000209493 1885 ntBASIC15.57■□□□□ 0.08
Pkd1O08852 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.57■□□□□ 0.08
Pkd1O08852 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pkd1O08852 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.57■□□□□ 0.08
Pkd1O08852 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pkd1O08852 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pkd1O08852 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pkd1O08852 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.55■□□□□ 0.08
Pkd1O08852 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.55■□□□□ 0.08
Pkd1O08852 Mir3960-201ENSMUST00000198213 73 ntBASIC15.55■□□□□ 0.08
Pkd1O08852 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pkd1O08852 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pkd1O08852 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pkd1O08852 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Pkd1O08852 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.52■□□□□ 0.08
Pkd1O08852 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pkd1O08852 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.52■□□□□ 0.07
Pkd1O08852 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
Pkd1O08852 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pkd1O08852 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pkd1O08852 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pkd1O08852 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pkd1O08852 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.51■□□□□ 0.07
Pkd1O08852 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pkd1O08852 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pkd1O08852 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pkd1O08852 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pkd1O08852 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pkd1O08852 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.5■□□□□ 0.07
Pkd1O08852 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.5■□□□□ 0.07
Pkd1O08852 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pkd1O08852 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pkd1O08852 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pkd1O08852 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pkd1O08852 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pkd1O08852 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pkd1O08852 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.49■□□□□ 0.07
Pkd1O08852 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pkd1O08852 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pkd1O08852 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pkd1O08852 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pkd1O08852 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.48■□□□□ 0.07
Pkd1O08852 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pkd1O08852 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pkd1O08852 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.46■□□□□ 0.07
Pkd1O08852 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.46■□□□□ 0.07
Pkd1O08852 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pkd1O08852 Gm5921-201ENSMUST00000075898 882 ntBASIC15.46■□□□□ 0.07
Pkd1O08852 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.46■□□□□ 0.06
Pkd1O08852 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pkd1O08852 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pkd1O08852 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pkd1O08852 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.45■□□□□ 0.06
Pkd1O08852 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.45■□□□□ 0.06
Pkd1O08852 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pkd1O08852 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pkd1O08852 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pkd1O08852 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pkd1O08852 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pkd1O08852 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pkd1O08852 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pkd1O08852 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pkd1O08852 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pkd1O08852 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pkd1O08852 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.43■□□□□ 0.06
Pkd1O08852 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pkd1O08852 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pkd1O08852 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pkd1O08852 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.42■□□□□ 0.06
Pkd1O08852 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
Pkd1O08852 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.41■□□□□ 0.06
Pkd1O08852 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pkd1O08852 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pkd1O08852 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pkd1O08852 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pkd1O08852 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms