Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28038F7BCN9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28038F7BCN9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Gm28038F7BCN9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Gm28038F7BCN9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Gm28038F7BCN9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28038F7BCN9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28038F7BCN9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28038F7BCN9 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.31■□□□□ 0.36
Gm28038F7BCN9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28038F7BCN9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Gm28038F7BCN9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28038F7BCN9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28038F7BCN9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28038F7BCN9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm28038F7BCN9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm28038F7BCN9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28038F7BCN9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28038F7BCN9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28038F7BCN9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28038F7BCN9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm28038F7BCN9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28038F7BCN9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28038F7BCN9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28038F7BCN9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28038F7BCN9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28038F7BCN9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gm28038F7BCN9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28038F7BCN9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gm28038F7BCN9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28038F7BCN9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28038F7BCN9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28038F7BCN9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28038F7BCN9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28038F7BCN9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28038F7BCN9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28038F7BCN9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm28038F7BCN9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28038F7BCN9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28038F7BCN9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28038F7BCN9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28038F7BCN9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm28038F7BCN9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm28038F7BCN9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28038F7BCN9 Gm16148-201ENSMUST00000119653 893 ntBASIC17.22■□□□□ 0.35
Gm28038F7BCN9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm28038F7BCN9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28038F7BCN9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm28038F7BCN9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm28038F7BCN9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28038F7BCN9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm28038F7BCN9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28038F7BCN9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm28038F7BCN9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm28038F7BCN9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Gm28038F7BCN9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28038F7BCN9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm28038F7BCN9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28038F7BCN9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm28038F7BCN9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28038F7BCN9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28038F7BCN9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gm28038F7BCN9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28038F7BCN9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28038F7BCN9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm28038F7BCN9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Gm28038F7BCN9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28038F7BCN9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm28038F7BCN9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm28038F7BCN9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Gm28038F7BCN9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28038F7BCN9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gm28038F7BCN9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28038F7BCN9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28038F7BCN9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28038F7BCN9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28038F7BCN9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28038F7BCN9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm28038F7BCN9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28038F7BCN9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28038F7BCN9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28038F7BCN9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm28038F7BCN9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm28038F7BCN9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28038F7BCN9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28038F7BCN9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm28038F7BCN9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm28038F7BCN9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28038F7BCN9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm28038F7BCN9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms