Protein–RNA interactions for Protein: E9Q7P9

Cdhr2, Cadherin-related family member 2, mousemouse

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr2E9Q7P9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Cdhr2E9Q7P9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Cdhr2E9Q7P9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cdhr2E9Q7P9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cdhr2E9Q7P9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cdhr2E9Q7P9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cdhr2E9Q7P9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
Cdhr2E9Q7P9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Cdhr2E9Q7P9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Cdhr2E9Q7P9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cdhr2E9Q7P9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31.89■■■□□ 2.7
Cdhr2E9Q7P9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cdhr2E9Q7P9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cdhr2E9Q7P9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cdhr2E9Q7P9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cdhr2E9Q7P9 Gm15039-201ENSMUST00000118914 875 ntBASIC31.86■■■□□ 2.69
Cdhr2E9Q7P9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Cdhr2E9Q7P9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cdhr2E9Q7P9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cdhr2E9Q7P9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cdhr2E9Q7P9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cdhr2E9Q7P9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cdhr2E9Q7P9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cdhr2E9Q7P9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cdhr2E9Q7P9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Cdhr2E9Q7P9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC31.79■■■□□ 2.68
Cdhr2E9Q7P9 Gm14523-201ENSMUST00000117260 558 ntBASIC31.77■■■□□ 2.68
Cdhr2E9Q7P9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Cdhr2E9Q7P9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Cdhr2E9Q7P9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cdhr2E9Q7P9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cdhr2E9Q7P9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Cdhr2E9Q7P9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Cdhr2E9Q7P9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC31.74■■■□□ 2.67
Cdhr2E9Q7P9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Cdhr2E9Q7P9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Cdhr2E9Q7P9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.71■■■□□ 2.67
Cdhr2E9Q7P9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Cdhr2E9Q7P9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Cdhr2E9Q7P9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Cdhr2E9Q7P9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Cdhr2E9Q7P9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
Cdhr2E9Q7P9 Gm37136-201ENSMUST00000194368 194 ntBASIC31.7■■■□□ 2.66
Cdhr2E9Q7P9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cdhr2E9Q7P9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.68■■■□□ 2.66
Cdhr2E9Q7P9 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.68■■■□□ 2.66
Cdhr2E9Q7P9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Cdhr2E9Q7P9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Cdhr2E9Q7P9 Gm22567-201ENSMUST00000175542 342 ntBASIC31.66■■■□□ 2.66
Cdhr2E9Q7P9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cdhr2E9Q7P9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.65■■■□□ 2.66
Cdhr2E9Q7P9 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.64■■■□□ 2.66
Cdhr2E9Q7P9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
Cdhr2E9Q7P9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Cdhr2E9Q7P9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.63■■■□□ 2.65
Cdhr2E9Q7P9 Gm5812-201ENSMUST00000061073 957 ntBASIC31.63■■■□□ 2.65
Cdhr2E9Q7P9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Cdhr2E9Q7P9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.62■■■□□ 2.65
Cdhr2E9Q7P9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.61■■■□□ 2.65
Cdhr2E9Q7P9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Cdhr2E9Q7P9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
Cdhr2E9Q7P9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cdhr2E9Q7P9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC31.59■■■□□ 2.65
Cdhr2E9Q7P9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cdhr2E9Q7P9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cdhr2E9Q7P9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cdhr2E9Q7P9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Cdhr2E9Q7P9 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.57■■■□□ 2.64
Cdhr2E9Q7P9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Cdhr2E9Q7P9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Cdhr2E9Q7P9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.57■■■□□ 2.64
Cdhr2E9Q7P9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cdhr2E9Q7P9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cdhr2E9Q7P9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Cdhr2E9Q7P9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC31.54■■■□□ 2.64
Cdhr2E9Q7P9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cdhr2E9Q7P9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cdhr2E9Q7P9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.54■■■□□ 2.64
Cdhr2E9Q7P9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cdhr2E9Q7P9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Cdhr2E9Q7P9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cdhr2E9Q7P9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cdhr2E9Q7P9 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.53■■■□□ 2.64
Cdhr2E9Q7P9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC31.53■■■□□ 2.64
Cdhr2E9Q7P9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cdhr2E9Q7P9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Cdhr2E9Q7P9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cdhr2E9Q7P9 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.52■■■□□ 2.64
Cdhr2E9Q7P9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Cdhr2E9Q7P9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Cdhr2E9Q7P9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Cdhr2E9Q7P9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
Cdhr2E9Q7P9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Cdhr2E9Q7P9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.49■■■□□ 2.63
Cdhr2E9Q7P9 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.49■■■□□ 2.63
Cdhr2E9Q7P9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Cdhr2E9Q7P9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Cdhr2E9Q7P9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cdhr2E9Q7P9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Cdhr2E9Q7P9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms