Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.91■■□□□ 1.1
Pcdh17E9PXF0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh17E9PXF0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh17E9PXF0 Gm11175-201ENSMUST00000116172 543 ntBASIC21.91■■□□□ 1.1
Pcdh17E9PXF0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Pcdh17E9PXF0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.9■■□□□ 1.1
Pcdh17E9PXF0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Pcdh17E9PXF0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.89■■□□□ 1.09
Pcdh17E9PXF0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh17E9PXF0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh17E9PXF0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh17E9PXF0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh17E9PXF0 Mir6538-201ENSMUST00000183713 110 ntBASIC21.87■■□□□ 1.09
Pcdh17E9PXF0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh17E9PXF0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh17E9PXF0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh17E9PXF0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh17E9PXF0 Gm6311-201ENSMUST00000073790 878 ntBASIC21.85■■□□□ 1.09
Pcdh17E9PXF0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh17E9PXF0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Pcdh17E9PXF0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh17E9PXF0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh17E9PXF0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Pcdh17E9PXF0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh17E9PXF0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh17E9PXF0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcdh17E9PXF0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.84■■□□□ 1.09
Pcdh17E9PXF0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh17E9PXF0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Pcdh17E9PXF0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh17E9PXF0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.82■■□□□ 1.08
Pcdh17E9PXF0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh17E9PXF0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh17E9PXF0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh17E9PXF0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh17E9PXF0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh17E9PXF0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh17E9PXF0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdh17E9PXF0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdh17E9PXF0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.78■■□□□ 1.08
Pcdh17E9PXF0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcdh17E9PXF0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.77■■□□□ 1.08
Pcdh17E9PXF0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Pcdh17E9PXF0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdh17E9PXF0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh17E9PXF0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh17E9PXF0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.73■■□□□ 1.07
Pcdh17E9PXF0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh17E9PXF0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh17E9PXF0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh17E9PXF0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdh17E9PXF0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh17E9PXF0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh17E9PXF0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdh17E9PXF0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdh17E9PXF0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Pcdh17E9PXF0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdh17E9PXF0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.7■■□□□ 1.06
Pcdh17E9PXF0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh17E9PXF0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh17E9PXF0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh17E9PXF0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pcdh17E9PXF0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh17E9PXF0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh17E9PXF0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh17E9PXF0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh17E9PXF0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh17E9PXF0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh17E9PXF0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh17E9PXF0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh17E9PXF0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh17E9PXF0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh17E9PXF0 Gm37136-201ENSMUST00000194368 194 ntBASIC21.65■■□□□ 1.06
Pcdh17E9PXF0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh17E9PXF0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh17E9PXF0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh17E9PXF0 Cap2-205ENSMUST00000225824 1634 ntBASIC21.64■■□□□ 1.05
Pcdh17E9PXF0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdh17E9PXF0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdh17E9PXF0 Gm4799-201ENSMUST00000095396 657 ntBASIC21.63■■□□□ 1.05
Pcdh17E9PXF0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh17E9PXF0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.62■■□□□ 1.05
Pcdh17E9PXF0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh17E9PXF0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh17E9PXF0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh17E9PXF0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh17E9PXF0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh17E9PXF0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.61■■□□□ 1.05
Pcdh17E9PXF0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh17E9PXF0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh17E9PXF0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdh17E9PXF0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdh17E9PXF0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.6■■□□□ 1.05
Pcdh17E9PXF0 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.6■■□□□ 1.05
Pcdh17E9PXF0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh17E9PXF0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh17E9PXF0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh17E9PXF0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh17E9PXF0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdh17E9PXF0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms