Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Cfap99A0A140LIX9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.16■■■□□ 2.1
Cfap99A0A140LIX9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cfap99A0A140LIX9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Cfap99A0A140LIX9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cfap99A0A140LIX9 Gm6311-201ENSMUST00000073790 878 ntBASIC28.14■■■□□ 2.1
Cfap99A0A140LIX9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Cfap99A0A140LIX9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cfap99A0A140LIX9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.13■■■□□ 2.09
Cfap99A0A140LIX9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.13■■■□□ 2.09
Cfap99A0A140LIX9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cfap99A0A140LIX9 Cap2-205ENSMUST00000225824 1634 ntBASIC28.11■■■□□ 2.09
Cfap99A0A140LIX9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Cfap99A0A140LIX9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cfap99A0A140LIX9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC28.1■■■□□ 2.09
Cfap99A0A140LIX9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.1■■■□□ 2.09
Cfap99A0A140LIX9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Cfap99A0A140LIX9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cfap99A0A140LIX9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
Cfap99A0A140LIX9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
Cfap99A0A140LIX9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cfap99A0A140LIX9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cfap99A0A140LIX9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Cfap99A0A140LIX9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
Cfap99A0A140LIX9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Cfap99A0A140LIX9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Cfap99A0A140LIX9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Cfap99A0A140LIX9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Cfap99A0A140LIX9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Cfap99A0A140LIX9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.03■■■□□ 2.08
Cfap99A0A140LIX9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Cfap99A0A140LIX9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.03■■■□□ 2.08
Cfap99A0A140LIX9 Particl-201ENSMUST00000205370 1560 ntBASIC28.03■■■□□ 2.08
Cfap99A0A140LIX9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Cfap99A0A140LIX9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Cfap99A0A140LIX9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Cfap99A0A140LIX9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.01■■■□□ 2.07
Cfap99A0A140LIX9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Cfap99A0A140LIX9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Cfap99A0A140LIX9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Cfap99A0A140LIX9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Cfap99A0A140LIX9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Cfap99A0A140LIX9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Cfap99A0A140LIX9 Gm30023-201ENSMUST00000197970 889 ntBASIC27.99■■■□□ 2.07
Cfap99A0A140LIX9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
Cfap99A0A140LIX9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.98■■■□□ 2.07
Cfap99A0A140LIX9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Cfap99A0A140LIX9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Cfap99A0A140LIX9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Cfap99A0A140LIX9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Cfap99A0A140LIX9 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.96■■■□□ 2.07
Cfap99A0A140LIX9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Cfap99A0A140LIX9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Cfap99A0A140LIX9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Cfap99A0A140LIX9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Cfap99A0A140LIX9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Cfap99A0A140LIX9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.94■■■□□ 2.06
Cfap99A0A140LIX9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cfap99A0A140LIX9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.93■■■□□ 2.06
Cfap99A0A140LIX9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Cfap99A0A140LIX9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Cfap99A0A140LIX9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.92■■■□□ 2.06
Cfap99A0A140LIX9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
Cfap99A0A140LIX9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Cfap99A0A140LIX9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Cfap99A0A140LIX9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Cfap99A0A140LIX9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.88■■■□□ 2.05
Cfap99A0A140LIX9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Cfap99A0A140LIX9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Cfap99A0A140LIX9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Cfap99A0A140LIX9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Cfap99A0A140LIX9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cfap99A0A140LIX9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cfap99A0A140LIX9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
Cfap99A0A140LIX9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
Cfap99A0A140LIX9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Cfap99A0A140LIX9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Cfap99A0A140LIX9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.83■■■□□ 2.05
Cfap99A0A140LIX9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
Cfap99A0A140LIX9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.83■■■□□ 2.05
Cfap99A0A140LIX9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Cfap99A0A140LIX9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Cfap99A0A140LIX9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cfap99A0A140LIX9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.81■■■□□ 2.04
Cfap99A0A140LIX9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cfap99A0A140LIX9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cfap99A0A140LIX9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.78■■■□□ 2.04
Cfap99A0A140LIX9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Cfap99A0A140LIX9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Cfap99A0A140LIX9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Cfap99A0A140LIX9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cfap99A0A140LIX9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cfap99A0A140LIX9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cfap99A0A140LIX9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cfap99A0A140LIX9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Cfap99A0A140LIX9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cfap99A0A140LIX9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Cfap99A0A140LIX9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cfap99A0A140LIX9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cfap99A0A140LIX9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms