Protein–RNA interactions for Protein: A0A0G2JGD3

Tmem116, Transmembrane protein 116 (Fragment), mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem116A0A0G2JGD3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmem116A0A0G2JGD3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmem116A0A0G2JGD3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tmem116A0A0G2JGD3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.7■□□□□ 0.74
Tmem116A0A0G2JGD3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tmem116A0A0G2JGD3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmem116A0A0G2JGD3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmem116A0A0G2JGD3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.69■□□□□ 0.74
Tmem116A0A0G2JGD3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.69■□□□□ 0.74
Tmem116A0A0G2JGD3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Tmem116A0A0G2JGD3 Gm11599-201ENSMUST00000118720 878 ntBASIC19.68■□□□□ 0.74
Tmem116A0A0G2JGD3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmem116A0A0G2JGD3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmem116A0A0G2JGD3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmem116A0A0G2JGD3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.67■□□□□ 0.74
Tmem116A0A0G2JGD3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.66■□□□□ 0.74
Tmem116A0A0G2JGD3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.66■□□□□ 0.74
Tmem116A0A0G2JGD3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tmem116A0A0G2JGD3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.65■□□□□ 0.74
Tmem116A0A0G2JGD3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmem116A0A0G2JGD3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmem116A0A0G2JGD3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tmem116A0A0G2JGD3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmem116A0A0G2JGD3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Tmem116A0A0G2JGD3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem116A0A0G2JGD3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem116A0A0G2JGD3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem116A0A0G2JGD3 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.61■□□□□ 0.73
Tmem116A0A0G2JGD3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem116A0A0G2JGD3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem116A0A0G2JGD3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem116A0A0G2JGD3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem116A0A0G2JGD3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem116A0A0G2JGD3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem116A0A0G2JGD3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.59■□□□□ 0.73
Tmem116A0A0G2JGD3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem116A0A0G2JGD3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem116A0A0G2JGD3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem116A0A0G2JGD3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tmem116A0A0G2JGD3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem116A0A0G2JGD3 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.55■□□□□ 0.72
Tmem116A0A0G2JGD3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem116A0A0G2JGD3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.54■□□□□ 0.72
Tmem116A0A0G2JGD3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem116A0A0G2JGD3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem116A0A0G2JGD3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem116A0A0G2JGD3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem116A0A0G2JGD3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem116A0A0G2JGD3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.5■□□□□ 0.71
Tmem116A0A0G2JGD3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem116A0A0G2JGD3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.49■□□□□ 0.71
Tmem116A0A0G2JGD3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem116A0A0G2JGD3 Gm37136-201ENSMUST00000194368 194 ntBASIC19.49■□□□□ 0.71
Tmem116A0A0G2JGD3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem116A0A0G2JGD3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Tmem116A0A0G2JGD3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem116A0A0G2JGD3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem116A0A0G2JGD3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tmem116A0A0G2JGD3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.47■□□□□ 0.71
Tmem116A0A0G2JGD3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Tmem116A0A0G2JGD3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tmem116A0A0G2JGD3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem116A0A0G2JGD3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tmem116A0A0G2JGD3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem116A0A0G2JGD3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem116A0A0G2JGD3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem116A0A0G2JGD3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.45■□□□□ 0.7
Tmem116A0A0G2JGD3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.45■□□□□ 0.7
Tmem116A0A0G2JGD3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.44■□□□□ 0.7
Tmem116A0A0G2JGD3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.44■□□□□ 0.7
Tmem116A0A0G2JGD3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem116A0A0G2JGD3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem116A0A0G2JGD3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem116A0A0G2JGD3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem116A0A0G2JGD3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.42■□□□□ 0.7
Tmem116A0A0G2JGD3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem116A0A0G2JGD3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem116A0A0G2JGD3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem116A0A0G2JGD3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem116A0A0G2JGD3 Gm4799-201ENSMUST00000095396 657 ntBASIC19.4■□□□□ 0.7
Tmem116A0A0G2JGD3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem116A0A0G2JGD3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.39■□□□□ 0.69
Tmem116A0A0G2JGD3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmem116A0A0G2JGD3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem116A0A0G2JGD3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.38■□□□□ 0.69
Tmem116A0A0G2JGD3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.37■□□□□ 0.69
Tmem116A0A0G2JGD3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Tmem116A0A0G2JGD3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.37■□□□□ 0.69
Tmem116A0A0G2JGD3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.37■□□□□ 0.69
Tmem116A0A0G2JGD3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmem116A0A0G2JGD3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmem116A0A0G2JGD3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tmem116A0A0G2JGD3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem116A0A0G2JGD3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.35■□□□□ 0.69
Tmem116A0A0G2JGD3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem116A0A0G2JGD3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem116A0A0G2JGD3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem116A0A0G2JGD3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tmem116A0A0G2JGD3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Tmem116A0A0G2JGD3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms