Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trav23A0A0G2JG17 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav23A0A0G2JG17 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Trav23A0A0G2JG17 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav23A0A0G2JG17 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav23A0A0G2JG17 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav23A0A0G2JG17 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav23A0A0G2JG17 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trav23A0A0G2JG17 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav23A0A0G2JG17 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav23A0A0G2JG17 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav23A0A0G2JG17 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trav23A0A0G2JG17 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav23A0A0G2JG17 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav23A0A0G2JG17 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav23A0A0G2JG17 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav23A0A0G2JG17 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trav23A0A0G2JG17 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Trav23A0A0G2JG17 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trav23A0A0G2JG17 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav23A0A0G2JG17 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.97■□□□□ 0.63
Trav23A0A0G2JG17 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav23A0A0G2JG17 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav23A0A0G2JG17 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav23A0A0G2JG17 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav23A0A0G2JG17 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav23A0A0G2JG17 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav23A0A0G2JG17 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav23A0A0G2JG17 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav23A0A0G2JG17 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trav23A0A0G2JG17 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Gm7432-201ENSMUST00000210343 879 ntBASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.89■□□□□ 0.61
Trav23A0A0G2JG17 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav23A0A0G2JG17 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav23A0A0G2JG17 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav23A0A0G2JG17 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav23A0A0G2JG17 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms