Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav23A0A0G2JG17 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trav23A0A0G2JG17 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav23A0A0G2JG17 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Trav23A0A0G2JG17 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav23A0A0G2JG17 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav23A0A0G2JG17 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav23A0A0G2JG17 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav23A0A0G2JG17 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trav23A0A0G2JG17 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav23A0A0G2JG17 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav23A0A0G2JG17 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav23A0A0G2JG17 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trav23A0A0G2JG17 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav23A0A0G2JG17 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav23A0A0G2JG17 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav23A0A0G2JG17 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav23A0A0G2JG17 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav23A0A0G2JG17 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trav23A0A0G2JG17 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Trav23A0A0G2JG17 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav23A0A0G2JG17 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trav23A0A0G2JG17 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav23A0A0G2JG17 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trav23A0A0G2JG17 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav23A0A0G2JG17 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.97■□□□□ 0.63
Trav23A0A0G2JG17 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav23A0A0G2JG17 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.95■□□□□ 0.62
Trav23A0A0G2JG17 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav23A0A0G2JG17 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav23A0A0G2JG17 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav23A0A0G2JG17 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav23A0A0G2JG17 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav23A0A0G2JG17 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav23A0A0G2JG17 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav23A0A0G2JG17 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav23A0A0G2JG17 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav23A0A0G2JG17 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trav23A0A0G2JG17 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Gm7432-201ENSMUST00000210343 879 ntBASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav23A0A0G2JG17 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.89■□□□□ 0.61
Trav23A0A0G2JG17 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav23A0A0G2JG17 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav23A0A0G2JG17 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav23A0A0G2JG17 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav23A0A0G2JG17 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav23A0A0G2JG17 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms