Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav7-5A0A0G2JFX6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7-5A0A0G2JFX6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7-5A0A0G2JFX6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-5A0A0G2JFX6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7-5A0A0G2JFX6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7-5A0A0G2JFX6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.4■□□□□ 0.54
Trav7-5A0A0G2JFX6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7-5A0A0G2JFX6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trav7-5A0A0G2JFX6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-5A0A0G2JFX6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trav7-5A0A0G2JFX6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-5A0A0G2JFX6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-5A0A0G2JFX6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav7-5A0A0G2JFX6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-5A0A0G2JFX6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-5A0A0G2JFX6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-5A0A0G2JFX6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trav7-5A0A0G2JFX6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-5A0A0G2JFX6 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.38■□□□□ 0.53
Trav7-5A0A0G2JFX6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trav7-5A0A0G2JFX6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.37■□□□□ 0.53
Trav7-5A0A0G2JFX6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-5A0A0G2JFX6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-5A0A0G2JFX6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7-5A0A0G2JFX6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7-5A0A0G2JFX6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-5A0A0G2JFX6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-5A0A0G2JFX6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav7-5A0A0G2JFX6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7-5A0A0G2JFX6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.34■□□□□ 0.53
Trav7-5A0A0G2JFX6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7-5A0A0G2JFX6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7-5A0A0G2JFX6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7-5A0A0G2JFX6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.33■□□□□ 0.53
Trav7-5A0A0G2JFX6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7-5A0A0G2JFX6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav7-5A0A0G2JFX6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7-5A0A0G2JFX6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7-5A0A0G2JFX6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7-5A0A0G2JFX6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trav7-5A0A0G2JFX6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav7-5A0A0G2JFX6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7-5A0A0G2JFX6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav7-5A0A0G2JFX6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-5A0A0G2JFX6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.31■□□□□ 0.52
Trav7-5A0A0G2JFX6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trav7-5A0A0G2JFX6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-5A0A0G2JFX6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-5A0A0G2JFX6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-5A0A0G2JFX6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-5A0A0G2JFX6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-5A0A0G2JFX6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-5A0A0G2JFX6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-5A0A0G2JFX6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trav7-5A0A0G2JFX6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-5A0A0G2JFX6 Gm7432-201ENSMUST00000210343 879 ntBASIC18.28■□□□□ 0.52
Trav7-5A0A0G2JFX6 Particl-201ENSMUST00000205370 1560 ntBASIC18.28■□□□□ 0.52
Trav7-5A0A0G2JFX6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-5A0A0G2JFX6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.27■□□□□ 0.52
Trav7-5A0A0G2JFX6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav7-5A0A0G2JFX6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7-5A0A0G2JFX6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav7-5A0A0G2JFX6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7-5A0A0G2JFX6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.26■□□□□ 0.51
Trav7-5A0A0G2JFX6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-5A0A0G2JFX6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-5A0A0G2JFX6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-5A0A0G2JFX6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-5A0A0G2JFX6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7-5A0A0G2JFX6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7-5A0A0G2JFX6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7-5A0A0G2JFX6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.23■□□□□ 0.51
Trav7-5A0A0G2JFX6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-5A0A0G2JFX6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-5A0A0G2JFX6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
Trav7-5A0A0G2JFX6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav7-5A0A0G2JFX6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7-5A0A0G2JFX6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7-5A0A0G2JFX6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav7-5A0A0G2JFX6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.21■□□□□ 0.51
Trav7-5A0A0G2JFX6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.21■□□□□ 0.51
Trav7-5A0A0G2JFX6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7-5A0A0G2JFX6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7-5A0A0G2JFX6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.21■□□□□ 0.5
Trav7-5A0A0G2JFX6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-5A0A0G2JFX6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-5A0A0G2JFX6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-5A0A0G2JFX6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-5A0A0G2JFX6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-5A0A0G2JFX6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-5A0A0G2JFX6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms