Protein–RNA interactions for Protein: A0A0G2JF94

Trav14-1, T cell receptor alpha variable 14-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-1A0A0G2JF94 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav14-1A0A0G2JF94 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14-1A0A0G2JF94 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14-1A0A0G2JF94 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14-1A0A0G2JF94 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14-1A0A0G2JF94 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14-1A0A0G2JF94 Gm24970-201ENSMUST00000175582 82 ntBASIC15.48■□□□□ 0.07
Trav14-1A0A0G2JF94 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.48■□□□□ 0.07
Trav14-1A0A0G2JF94 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14-1A0A0G2JF94 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14-1A0A0G2JF94 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14-1A0A0G2JF94 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav14-1A0A0G2JF94 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14-1A0A0G2JF94 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14-1A0A0G2JF94 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav14-1A0A0G2JF94 Gm9397-201ENSMUST00000200125 605 ntBASIC15.47■□□□□ 0.07
Trav14-1A0A0G2JF94 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav14-1A0A0G2JF94 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Trav14-1A0A0G2JF94 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav14-1A0A0G2JF94 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14-1A0A0G2JF94 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14-1A0A0G2JF94 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav14-1A0A0G2JF94 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav14-1A0A0G2JF94 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14-1A0A0G2JF94 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14-1A0A0G2JF94 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav14-1A0A0G2JF94 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav14-1A0A0G2JF94 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14-1A0A0G2JF94 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav14-1A0A0G2JF94 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14-1A0A0G2JF94 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14-1A0A0G2JF94 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav14-1A0A0G2JF94 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14-1A0A0G2JF94 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.44■□□□□ 0.06
Trav14-1A0A0G2JF94 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14-1A0A0G2JF94 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav14-1A0A0G2JF94 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav14-1A0A0G2JF94 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.41■□□□□ 0.06
Trav14-1A0A0G2JF94 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14-1A0A0G2JF94 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav14-1A0A0G2JF94 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14-1A0A0G2JF94 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14-1A0A0G2JF94 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14-1A0A0G2JF94 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14-1A0A0G2JF94 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14-1A0A0G2JF94 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav14-1A0A0G2JF94 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav14-1A0A0G2JF94 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14-1A0A0G2JF94 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav14-1A0A0G2JF94 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14-1A0A0G2JF94 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav14-1A0A0G2JF94 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.38■□□□□ 0.05
Trav14-1A0A0G2JF94 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14-1A0A0G2JF94 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14-1A0A0G2JF94 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav14-1A0A0G2JF94 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14-1A0A0G2JF94 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14-1A0A0G2JF94 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav14-1A0A0G2JF94 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14-1A0A0G2JF94 Gm45855-201ENSMUST00000212546 880 ntBASIC15.36■□□□□ 0.05
Trav14-1A0A0G2JF94 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14-1A0A0G2JF94 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav14-1A0A0G2JF94 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14-1A0A0G2JF94 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.35■□□□□ 0.05
Trav14-1A0A0G2JF94 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14-1A0A0G2JF94 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14-1A0A0G2JF94 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14-1A0A0G2JF94 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14-1A0A0G2JF94 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14-1A0A0G2JF94 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav14-1A0A0G2JF94 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14-1A0A0G2JF94 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav14-1A0A0G2JF94 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav14-1A0A0G2JF94 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav14-1A0A0G2JF94 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14-1A0A0G2JF94 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14-1A0A0G2JF94 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav14-1A0A0G2JF94 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Trav14-1A0A0G2JF94 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14-1A0A0G2JF94 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14-1A0A0G2JF94 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14-1A0A0G2JF94 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14-1A0A0G2JF94 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14-1A0A0G2JF94 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav14-1A0A0G2JF94 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav14-1A0A0G2JF94 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14-1A0A0G2JF94 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14-1A0A0G2JF94 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14-1A0A0G2JF94 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14-1A0A0G2JF94 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14-1A0A0G2JF94 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14-1A0A0G2JF94 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 270.8 ms