Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-27A0A0G2JF28 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-27A0A0G2JF28 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-27A0A0G2JF28 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv8-27A0A0G2JF28 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.77□□□□□ -0.04
Igkv8-27A0A0G2JF28 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv8-27A0A0G2JF28 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv8-27A0A0G2JF28 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv8-27A0A0G2JF28 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC14.77□□□□□ -0.05
Igkv8-27A0A0G2JF28 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv8-27A0A0G2JF28 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv8-27A0A0G2JF28 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv8-27A0A0G2JF28 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Igkv8-27A0A0G2JF28 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC14.76□□□□□ -0.05
Igkv8-27A0A0G2JF28 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv8-27A0A0G2JF28 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv8-27A0A0G2JF28 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Igkv8-27A0A0G2JF28 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Igkv8-27A0A0G2JF28 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC14.75□□□□□ -0.05
Igkv8-27A0A0G2JF28 Pcf11-205ENSMUST00000208255 1720 ntBASIC14.75□□□□□ -0.05
Igkv8-27A0A0G2JF28 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv8-27A0A0G2JF28 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv8-27A0A0G2JF28 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Igkv8-27A0A0G2JF28 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv8-27A0A0G2JF28 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv8-27A0A0G2JF28 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv8-27A0A0G2JF28 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv8-27A0A0G2JF28 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv8-27A0A0G2JF28 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv8-27A0A0G2JF28 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Igkv8-27A0A0G2JF28 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv8-27A0A0G2JF28 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv8-27A0A0G2JF28 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv8-27A0A0G2JF28 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Igkv8-27A0A0G2JF28 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Igkv8-27A0A0G2JF28 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv8-27A0A0G2JF28 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv8-27A0A0G2JF28 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv8-27A0A0G2JF28 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Igkv8-27A0A0G2JF28 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC14.71□□□□□ -0.05
Igkv8-27A0A0G2JF28 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv8-27A0A0G2JF28 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-27A0A0G2JF28 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-27A0A0G2JF28 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Igkv8-27A0A0G2JF28 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-27A0A0G2JF28 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-27A0A0G2JF28 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-27A0A0G2JF28 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Igkv8-27A0A0G2JF28 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv8-27A0A0G2JF28 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv8-27A0A0G2JF28 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv8-27A0A0G2JF28 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv8-27A0A0G2JF28 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Igkv8-27A0A0G2JF28 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv8-27A0A0G2JF28 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Igkv8-27A0A0G2JF28 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv8-27A0A0G2JF28 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv8-27A0A0G2JF28 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv8-27A0A0G2JF28 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv8-27A0A0G2JF28 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.67□□□□□ -0.06
Igkv8-27A0A0G2JF28 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Igkv8-27A0A0G2JF28 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Igkv8-27A0A0G2JF28 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv8-27A0A0G2JF28 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv8-27A0A0G2JF28 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv8-27A0A0G2JF28 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv8-27A0A0G2JF28 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Igkv8-27A0A0G2JF28 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Igkv8-27A0A0G2JF28 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv8-27A0A0G2JF28 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC14.64□□□□□ -0.07
Igkv8-27A0A0G2JF28 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC14.64□□□□□ -0.07
Igkv8-27A0A0G2JF28 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv8-27A0A0G2JF28 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv8-27A0A0G2JF28 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv8-27A0A0G2JF28 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv8-27A0A0G2JF28 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv8-27A0A0G2JF28 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Igkv8-27A0A0G2JF28 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv8-27A0A0G2JF28 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv8-27A0A0G2JF28 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Igkv8-27A0A0G2JF28 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv8-27A0A0G2JF28 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv8-27A0A0G2JF28 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms