Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.59■□□□□ 0.89
Sirpb1bA0A0A6YXN8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.59■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.54■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sirpb1bA0A0A6YXN8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sirpb1bA0A0A6YXN8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Gm7432-201ENSMUST00000210343 879 ntBASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sirpb1bA0A0A6YXN8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.44■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sirpb1bA0A0A6YXN8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sirpb1bA0A0A6YXN8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.39■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.37■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Sirpb1bA0A0A6YXN8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms