Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28897A0A087WP44 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28897A0A087WP44 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28897A0A087WP44 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28897A0A087WP44 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28897A0A087WP44 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Gm28897A0A087WP44 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28897A0A087WP44 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28897A0A087WP44 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28897A0A087WP44 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28897A0A087WP44 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm28897A0A087WP44 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm28897A0A087WP44 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28897A0A087WP44 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28897A0A087WP44 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28897A0A087WP44 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28897A0A087WP44 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm28897A0A087WP44 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Gm28897A0A087WP44 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm28897A0A087WP44 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm28897A0A087WP44 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm28897A0A087WP44 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm28897A0A087WP44 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28897A0A087WP44 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28897A0A087WP44 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28897A0A087WP44 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28897A0A087WP44 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm28897A0A087WP44 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28897A0A087WP44 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28897A0A087WP44 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.62■□□□□ 0.89
Gm28897A0A087WP44 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28897A0A087WP44 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28897A0A087WP44 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28897A0A087WP44 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28897A0A087WP44 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28897A0A087WP44 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28897A0A087WP44 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28897A0A087WP44 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gm28897A0A087WP44 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28897A0A087WP44 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gm28897A0A087WP44 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.6■□□□□ 0.89
Gm28897A0A087WP44 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28897A0A087WP44 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm28897A0A087WP44 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28897A0A087WP44 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28897A0A087WP44 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.58■□□□□ 0.89
Gm28897A0A087WP44 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm28897A0A087WP44 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm28897A0A087WP44 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm28897A0A087WP44 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28897A0A087WP44 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28897A0A087WP44 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28897A0A087WP44 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Gm28897A0A087WP44 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28897A0A087WP44 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28897A0A087WP44 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28897A0A087WP44 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28897A0A087WP44 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gm28897A0A087WP44 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28897A0A087WP44 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28897A0A087WP44 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28897A0A087WP44 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28897A0A087WP44 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28897A0A087WP44 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28897A0A087WP44 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.54■□□□□ 0.88
Gm28897A0A087WP44 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28897A0A087WP44 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.54■□□□□ 0.88
Gm28897A0A087WP44 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gm28897A0A087WP44 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28897A0A087WP44 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.53■□□□□ 0.88
Gm28897A0A087WP44 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm28897A0A087WP44 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28897A0A087WP44 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28897A0A087WP44 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28897A0A087WP44 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28897A0A087WP44 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gm28897A0A087WP44 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28897A0A087WP44 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28897A0A087WP44 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28897A0A087WP44 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm28897A0A087WP44 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gm28897A0A087WP44 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28897A0A087WP44 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gm28897A0A087WP44 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28897A0A087WP44 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28897A0A087WP44 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28897A0A087WP44 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28897A0A087WP44 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28897A0A087WP44 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28897A0A087WP44 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28897A0A087WP44 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28897A0A087WP44 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28897A0A087WP44 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28897A0A087WP44 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28897A0A087WP44 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm28897A0A087WP44 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28897A0A087WP44 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Gm28897A0A087WP44 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28897A0A087WP44 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28897A0A087WP44 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms