Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9d-1A0A075B699 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav9d-1A0A075B699 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9d-1A0A075B699 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9d-1A0A075B699 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9d-1A0A075B699 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9d-1A0A075B699 Gm45855-201ENSMUST00000212546 880 ntBASIC18.06■□□□□ 0.48
Trav9d-1A0A075B699 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9d-1A0A075B699 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav9d-1A0A075B699 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav9d-1A0A075B699 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav9d-1A0A075B699 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trav9d-1A0A075B699 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav9d-1A0A075B699 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9d-1A0A075B699 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9d-1A0A075B699 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9d-1A0A075B699 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav9d-1A0A075B699 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav9d-1A0A075B699 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav9d-1A0A075B699 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav9d-1A0A075B699 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9d-1A0A075B699 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9d-1A0A075B699 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.01■□□□□ 0.47
Trav9d-1A0A075B699 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9d-1A0A075B699 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav9d-1A0A075B699 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav9d-1A0A075B699 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav9d-1A0A075B699 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav9d-1A0A075B699 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav9d-1A0A075B699 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav9d-1A0A075B699 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav9d-1A0A075B699 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav9d-1A0A075B699 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9d-1A0A075B699 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trav9d-1A0A075B699 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9d-1A0A075B699 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9d-1A0A075B699 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav9d-1A0A075B699 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav9d-1A0A075B699 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav9d-1A0A075B699 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav9d-1A0A075B699 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Trav9d-1A0A075B699 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav9d-1A0A075B699 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Gm30023-201ENSMUST00000197970 889 ntBASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9d-1A0A075B699 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav9d-1A0A075B699 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav9d-1A0A075B699 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav9d-1A0A075B699 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav9d-1A0A075B699 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav9d-1A0A075B699 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav9d-1A0A075B699 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav9d-1A0A075B699 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav9d-1A0A075B699 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9d-1A0A075B699 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9d-1A0A075B699 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9d-1A0A075B699 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9d-1A0A075B699 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9d-1A0A075B699 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9d-1A0A075B699 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9d-1A0A075B699 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav9d-1A0A075B699 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav9d-1A0A075B699 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav9d-1A0A075B699 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Trav9d-1A0A075B699 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav9d-1A0A075B699 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-1A0A075B699 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav9d-1A0A075B699 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9d-1A0A075B699 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9d-1A0A075B699 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9d-1A0A075B699 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9d-1A0A075B699 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9d-1A0A075B699 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9d-1A0A075B699 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav9d-1A0A075B699 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9d-1A0A075B699 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9d-1A0A075B699 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9d-1A0A075B699 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9d-1A0A075B699 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav9d-1A0A075B699 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.85■□□□□ 0.45
Trav9d-1A0A075B699 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav9d-1A0A075B699 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Trav9d-1A0A075B699 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav9d-1A0A075B699 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms