Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav17A0A075B655 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trav17A0A075B655 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trav17A0A075B655 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav17A0A075B655 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav17A0A075B655 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav17A0A075B655 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav17A0A075B655 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav17A0A075B655 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav17A0A075B655 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav17A0A075B655 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav17A0A075B655 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav17A0A075B655 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav17A0A075B655 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav17A0A075B655 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav17A0A075B655 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav17A0A075B655 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav17A0A075B655 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav17A0A075B655 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav17A0A075B655 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav17A0A075B655 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav17A0A075B655 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav17A0A075B655 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav17A0A075B655 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav17A0A075B655 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav17A0A075B655 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.58■□□□□ 0.56
Trav17A0A075B655 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav17A0A075B655 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Trav17A0A075B655 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.58■□□□□ 0.56
Trav17A0A075B655 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav17A0A075B655 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav17A0A075B655 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav17A0A075B655 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav17A0A075B655 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav17A0A075B655 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav17A0A075B655 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav17A0A075B655 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav17A0A075B655 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav17A0A075B655 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav17A0A075B655 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav17A0A075B655 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav17A0A075B655 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav17A0A075B655 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav17A0A075B655 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav17A0A075B655 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav17A0A075B655 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav17A0A075B655 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav17A0A075B655 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav17A0A075B655 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trav17A0A075B655 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Trav17A0A075B655 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav17A0A075B655 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav17A0A075B655 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav17A0A075B655 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav17A0A075B655 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav17A0A075B655 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav17A0A075B655 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav17A0A075B655 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav17A0A075B655 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav17A0A075B655 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav17A0A075B655 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav17A0A075B655 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.49■□□□□ 0.55
Trav17A0A075B655 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav17A0A075B655 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav17A0A075B655 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav17A0A075B655 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav17A0A075B655 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav17A0A075B655 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Trav17A0A075B655 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav17A0A075B655 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav17A0A075B655 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav17A0A075B655 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Trav17A0A075B655 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trav17A0A075B655 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav17A0A075B655 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav17A0A075B655 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav17A0A075B655 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav17A0A075B655 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav17A0A075B655 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trav17A0A075B655 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav17A0A075B655 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav17A0A075B655 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav17A0A075B655 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav17A0A075B655 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trav17A0A075B655 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav17A0A075B655 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms