Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4n-4A0A075B615 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav4n-4A0A075B615 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4n-4A0A075B615 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4n-4A0A075B615 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4n-4A0A075B615 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4n-4A0A075B615 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav4n-4A0A075B615 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4n-4A0A075B615 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4n-4A0A075B615 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trav4n-4A0A075B615 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4n-4A0A075B615 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav4n-4A0A075B615 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav4n-4A0A075B615 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4n-4A0A075B615 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4n-4A0A075B615 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav4n-4A0A075B615 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.33■□□□□ 0.21
Trav4n-4A0A075B615 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav4n-4A0A075B615 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4n-4A0A075B615 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4n-4A0A075B615 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4n-4A0A075B615 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4n-4A0A075B615 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4n-4A0A075B615 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4n-4A0A075B615 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav4n-4A0A075B615 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav4n-4A0A075B615 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4n-4A0A075B615 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4n-4A0A075B615 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4n-4A0A075B615 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav4n-4A0A075B615 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4n-4A0A075B615 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4n-4A0A075B615 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.28■□□□□ 0.2
Trav4n-4A0A075B615 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4n-4A0A075B615 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4n-4A0A075B615 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav4n-4A0A075B615 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trav4n-4A0A075B615 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4n-4A0A075B615 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4n-4A0A075B615 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4n-4A0A075B615 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav4n-4A0A075B615 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav4n-4A0A075B615 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav4n-4A0A075B615 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav4n-4A0A075B615 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.26■□□□□ 0.19
Trav4n-4A0A075B615 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4n-4A0A075B615 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4n-4A0A075B615 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trav4n-4A0A075B615 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav4n-4A0A075B615 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4n-4A0A075B615 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4n-4A0A075B615 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4n-4A0A075B615 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4n-4A0A075B615 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4n-4A0A075B615 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4n-4A0A075B615 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4n-4A0A075B615 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4n-4A0A075B615 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Trav4n-4A0A075B615 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4n-4A0A075B615 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav4n-4A0A075B615 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav4n-4A0A075B615 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4n-4A0A075B615 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4n-4A0A075B615 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trav4n-4A0A075B615 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav4n-4A0A075B615 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4n-4A0A075B615 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4n-4A0A075B615 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4n-4A0A075B615 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4n-4A0A075B615 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav4n-4A0A075B615 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav4n-4A0A075B615 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4n-4A0A075B615 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav4n-4A0A075B615 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4n-4A0A075B615 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms