Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv3-1A0A075B5S6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.85■□□□□ 0.61
Ighv3-1A0A075B5S6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv3-1A0A075B5S6 Gm30023-201ENSMUST00000197970 889 ntBASIC18.84■□□□□ 0.61
Ighv3-1A0A075B5S6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv3-1A0A075B5S6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Ighv3-1A0A075B5S6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Ighv3-1A0A075B5S6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Ighv3-1A0A075B5S6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv3-1A0A075B5S6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv3-1A0A075B5S6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ighv3-1A0A075B5S6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv3-1A0A075B5S6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv3-1A0A075B5S6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv3-1A0A075B5S6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv3-1A0A075B5S6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv3-1A0A075B5S6 Mir6538-201ENSMUST00000183713 110 ntBASIC18.81■□□□□ 0.6
Ighv3-1A0A075B5S6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv3-1A0A075B5S6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv3-1A0A075B5S6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.8■□□□□ 0.6
Ighv3-1A0A075B5S6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv3-1A0A075B5S6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv3-1A0A075B5S6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.79■□□□□ 0.6
Ighv3-1A0A075B5S6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv3-1A0A075B5S6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv3-1A0A075B5S6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv3-1A0A075B5S6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv3-1A0A075B5S6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv3-1A0A075B5S6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv3-1A0A075B5S6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv3-1A0A075B5S6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv3-1A0A075B5S6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv3-1A0A075B5S6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv3-1A0A075B5S6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv3-1A0A075B5S6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.76■□□□□ 0.59
Ighv3-1A0A075B5S6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv3-1A0A075B5S6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ighv3-1A0A075B5S6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.75■□□□□ 0.59
Ighv3-1A0A075B5S6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv3-1A0A075B5S6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv3-1A0A075B5S6 Particl-201ENSMUST00000205370 1560 ntBASIC18.74■□□□□ 0.59
Ighv3-1A0A075B5S6 Gm11175-201ENSMUST00000116172 543 ntBASIC18.74■□□□□ 0.59
Ighv3-1A0A075B5S6 Gm6311-201ENSMUST00000073790 878 ntBASIC18.74■□□□□ 0.59
Ighv3-1A0A075B5S6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv3-1A0A075B5S6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Ighv3-1A0A075B5S6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ighv3-1A0A075B5S6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv3-1A0A075B5S6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv3-1A0A075B5S6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv3-1A0A075B5S6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv3-1A0A075B5S6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ighv3-1A0A075B5S6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv3-1A0A075B5S6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.71■□□□□ 0.59
Ighv3-1A0A075B5S6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.7■□□□□ 0.58
Ighv3-1A0A075B5S6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv3-1A0A075B5S6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv3-1A0A075B5S6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv3-1A0A075B5S6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv3-1A0A075B5S6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv3-1A0A075B5S6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ighv3-1A0A075B5S6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ighv3-1A0A075B5S6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv3-1A0A075B5S6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ighv3-1A0A075B5S6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-1A0A075B5S6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-1A0A075B5S6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-1A0A075B5S6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-1A0A075B5S6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-1A0A075B5S6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv3-1A0A075B5S6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv3-1A0A075B5S6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.64■□□□□ 0.57
Ighv3-1A0A075B5S6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv3-1A0A075B5S6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv3-1A0A075B5S6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv3-1A0A075B5S6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ighv3-1A0A075B5S6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv3-1A0A075B5S6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv3-1A0A075B5S6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv3-1A0A075B5S6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv3-1A0A075B5S6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-1A0A075B5S6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-1A0A075B5S6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ighv3-1A0A075B5S6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-1A0A075B5S6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.61■□□□□ 0.57
Ighv3-1A0A075B5S6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ighv3-1A0A075B5S6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv3-1A0A075B5S6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-1A0A075B5S6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ighv3-1A0A075B5S6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-1A0A075B5S6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.59■□□□□ 0.57
Ighv3-1A0A075B5S6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-1A0A075B5S6 Cap2-205ENSMUST00000225824 1634 ntBASIC18.59■□□□□ 0.57
Ighv3-1A0A075B5S6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.58■□□□□ 0.56
Ighv3-1A0A075B5S6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv3-1A0A075B5S6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.56■□□□□ 0.56
Ighv3-1A0A075B5S6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ighv3-1A0A075B5S6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ighv3-1A0A075B5S6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ighv3-1A0A075B5S6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv3-1A0A075B5S6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms