Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Foxd1Q61345 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.33■□□□□ 0.68
Foxd1Q61345 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxd1Q61345 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.32■□□□□ 0.68
Foxd1Q61345 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Gm43767-201ENSMUST00000198933 381 ntBASIC19.32■□□□□ 0.68
Foxd1Q61345 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd1Q61345 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.31■□□□□ 0.68
Foxd1Q61345 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxd1Q61345 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxd1Q61345 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.31■□□□□ 0.68
Foxd1Q61345 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Foxd1Q61345 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd1Q61345 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd1Q61345 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd1Q61345 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Foxd1Q61345 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Foxd1Q61345 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Foxd1Q61345 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd1Q61345 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd1Q61345 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd1Q61345 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd1Q61345 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.3■□□□□ 0.68
Foxd1Q61345 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.3■□□□□ 0.68
Foxd1Q61345 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd1Q61345 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.3■□□□□ 0.68
Foxd1Q61345 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.3■□□□□ 0.68
Foxd1Q61345 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd1Q61345 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Foxd1Q61345 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.29■□□□□ 0.68
Foxd1Q61345 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Foxd1Q61345 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.29■□□□□ 0.68
Foxd1Q61345 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd1Q61345 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.28■□□□□ 0.68
Foxd1Q61345 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd1Q61345 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd1Q61345 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Foxd1Q61345 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd1Q61345 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd1Q61345 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.28■□□□□ 0.68
Foxd1Q61345 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.28■□□□□ 0.68
Foxd1Q61345 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd1Q61345 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Foxd1Q61345 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.28■□□□□ 0.68
Foxd1Q61345 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Foxd1Q61345 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd1Q61345 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd1Q61345 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd1Q61345 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.27■□□□□ 0.68
Foxd1Q61345 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Foxd1Q61345 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.27■□□□□ 0.68
Foxd1Q61345 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxd1Q61345 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.27■□□□□ 0.68
Foxd1Q61345 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxd1Q61345 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxd1Q61345 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxd1Q61345 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxd1Q61345 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxd1Q61345 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 363.6 ms