Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Mre11Q61216 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.16■□□□□ 0.82
Mre11Q61216 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC20.16■□□□□ 0.82
Mre11Q61216 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.15■□□□□ 0.82
Mre11Q61216 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Mre11Q61216 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mre11Q61216 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mre11Q61216 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Mre11Q61216 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.15■□□□□ 0.82
Mre11Q61216 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.15■□□□□ 0.82
Mre11Q61216 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mre11Q61216 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Mre11Q61216 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mre11Q61216 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.14■□□□□ 0.81
Mre11Q61216 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Mre11Q61216 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.14■□□□□ 0.81
Mre11Q61216 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mre11Q61216 Prob1-201ENSMUST00000097619 3021 ntBASIC20.13■□□□□ 0.81
Mre11Q61216 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC20.13■□□□□ 0.81
Mre11Q61216 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Gm6420-201ENSMUST00000193885 723 ntBASIC20.13■□□□□ 0.81
Mre11Q61216 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mre11Q61216 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.12■□□□□ 0.81
Mre11Q61216 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 Gm13234-201ENSMUST00000120010 747 ntBASIC20.12■□□□□ 0.81
Mre11Q61216 Nespas-201ENSMUST00000143738 1083 ntBASIC20.12■□□□□ 0.81
Mre11Q61216 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Mre11Q61216 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.12■□□□□ 0.81
Mre11Q61216 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Mre11Q61216 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Mre11Q61216 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.12■□□□□ 0.81
Mre11Q61216 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mre11Q61216 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Mre11Q61216 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Mre11Q61216 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Asic1-205ENSMUST00000228185 1818 ntBASIC20.11■□□□□ 0.81
Mre11Q61216 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Mre11Q61216 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mre11Q61216 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Mre11Q61216 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Mre11Q61216 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms