Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfdn6Q03958 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Gm27463-201ENSMUST00000183569 57 ntBASIC16.84■□□□□ 0.29
Pfdn6Q03958 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.84■□□□□ 0.29
Pfdn6Q03958 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.84■□□□□ 0.29
Pfdn6Q03958 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfdn6Q03958 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pfdn6Q03958 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pfdn6Q03958 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.83■□□□□ 0.29
Pfdn6Q03958 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Gm18958-201ENSMUST00000174258 762 ntBASIC16.83■□□□□ 0.28
Pfdn6Q03958 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.83■□□□□ 0.28
Pfdn6Q03958 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pfdn6Q03958 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn6Q03958 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Pfdn6Q03958 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn6Q03958 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms