Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Thumpd3P97770 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Thumpd3P97770 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Thumpd3P97770 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Thumpd3P97770 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Thumpd3P97770 Gm13836-201ENSMUST00000121159 501 ntBASIC17.09■□□□□ 0.33
Thumpd3P97770 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Thumpd3P97770 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Thumpd3P97770 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Gm10138-203ENSMUST00000206952 366 ntBASIC17.09■□□□□ 0.33
Thumpd3P97770 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd3P97770 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Thumpd3P97770 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.09■□□□□ 0.33
Thumpd3P97770 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Thumpd3P97770 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Thumpd3P97770 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Thumpd3P97770 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Thumpd3P97770 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd3P97770 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.08■□□□□ 0.32
Thumpd3P97770 Gm15565-201ENSMUST00000118890 427 ntBASIC17.08■□□□□ 0.32
Thumpd3P97770 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd3P97770 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd3P97770 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd3P97770 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd3P97770 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd3P97770 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.07■□□□□ 0.32
Thumpd3P97770 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Thumpd3P97770 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Thumpd3P97770 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Thumpd3P97770 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.07■□□□□ 0.32
Thumpd3P97770 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.07■□□□□ 0.32
Thumpd3P97770 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Thumpd3P97770 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd3P97770 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Thumpd3P97770 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Thumpd3P97770 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.07■□□□□ 0.32
Thumpd3P97770 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Thumpd3P97770 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Thumpd3P97770 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.06■□□□□ 0.32
Thumpd3P97770 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.06■□□□□ 0.32
Thumpd3P97770 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.06■□□□□ 0.32
Thumpd3P97770 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.06■□□□□ 0.32
Thumpd3P97770 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.06■□□□□ 0.32
Thumpd3P97770 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Thumpd3P97770 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd3P97770 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Thumpd3P97770 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Thumpd3P97770 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.05■□□□□ 0.32
Thumpd3P97770 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.05■□□□□ 0.32
Thumpd3P97770 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd3P97770 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.05■□□□□ 0.32
Thumpd3P97770 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms