Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NclP09405 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
NclP09405 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NclP09405 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
NclP09405 Tfap2a-209ENSMUST00000225180 1828 ntBASIC24.86■■□□□ 1.57
NclP09405 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC24.86■■□□□ 1.57
NclP09405 Shroom3-211ENSMUST00000225438 5742 ntBASIC24.86■■□□□ 1.57
NclP09405 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NclP09405 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Gm14464-201ENSMUST00000119658 1254 ntBASIC24.85■■□□□ 1.57
NclP09405 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC24.85■■□□□ 1.57
NclP09405 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NclP09405 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
NclP09405 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Gm15794-201ENSMUST00000120182 631 ntBASIC24.84■■□□□ 1.57
NclP09405 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC24.84■■□□□ 1.57
NclP09405 Gm44450-201ENSMUST00000199528 114 ntBASIC24.84■■□□□ 1.57
NclP09405 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NclP09405 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
NclP09405 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NclP09405 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
NclP09405 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NclP09405 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
NclP09405 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NclP09405 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NclP09405 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
NclP09405 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NclP09405 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC24.82■■□□□ 1.56
NclP09405 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
NclP09405 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NclP09405 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NclP09405 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NclP09405 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NclP09405 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NclP09405 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC24.81■■□□□ 1.56
NclP09405 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NclP09405 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NclP09405 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NclP09405 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NclP09405 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NclP09405 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NclP09405 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NclP09405 Gm29707-201ENSMUST00000196325 491 ntBASIC24.8■■□□□ 1.56
NclP09405 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NclP09405 Gm37519-201ENSMUST00000191687 2210 ntBASIC24.8■■□□□ 1.56
NclP09405 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC24.79■■□□□ 1.56
NclP09405 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
NclP09405 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC24.79■■□□□ 1.56
NclP09405 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC24.79■■□□□ 1.56
NclP09405 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
NclP09405 Zkscan4-202ENSMUST00000225845 1506 ntBASIC24.79■■□□□ 1.56
NclP09405 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
NclP09405 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
NclP09405 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
NclP09405 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NclP09405 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NclP09405 Gm42900-201ENSMUST00000197184 2167 ntBASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms