Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
4933424G06RikA0A140LIP3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm27742-201ENSMUST00000184667 60 ntBASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
4933424G06RikA0A140LIP3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Mir3081-201ENSMUST00000175305 84 ntBASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
4933424G06RikA0A140LIP3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm28033-201ENSMUST00000184224 96 ntBASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Gm17971-201ENSMUST00000190239 806 ntBASIC17.09■□□□□ 0.33
4933424G06RikA0A140LIP3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 1108.7 ms