Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Znf235Q61116 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Znf235Q61116 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Znf235Q61116 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.56■□□□□ 0.4
Znf235Q61116 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.56■□□□□ 0.4
Znf235Q61116 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.56■□□□□ 0.4
Znf235Q61116 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Znf235Q61116 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Znf235Q61116 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Gm12895-201ENSMUST00000122214 226 ntBASIC17.55■□□□□ 0.4
Znf235Q61116 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.55■□□□□ 0.4
Znf235Q61116 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.55■□□□□ 0.4
Znf235Q61116 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Znf235Q61116 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Znf235Q61116 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Znf235Q61116 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Znf235Q61116 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Znf235Q61116 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Znf235Q61116 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Znf235Q61116 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.54■□□□□ 0.4
Znf235Q61116 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Znf235Q61116 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.54■□□□□ 0.4
Znf235Q61116 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Znf235Q61116 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Znf235Q61116 Gm13312-201ENSMUST00000119631 718 ntBASIC17.53■□□□□ 0.4
Znf235Q61116 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Znf235Q61116 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.53■□□□□ 0.4
Znf235Q61116 Gm44430-201ENSMUST00000203376 995 ntBASIC17.53■□□□□ 0.4
Znf235Q61116 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Znf235Q61116 Birc2-201ENSMUST00000054878 378 ntBASIC17.53■□□□□ 0.4
Znf235Q61116 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Znf235Q61116 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Znf235Q61116 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Znf235Q61116 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Znf235Q61116 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.52■□□□□ 0.4
Znf235Q61116 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Znf235Q61116 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Znf235Q61116 Gm7153-201ENSMUST00000117092 455 ntBASIC17.52■□□□□ 0.4
Znf235Q61116 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.52■□□□□ 0.4
Znf235Q61116 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.52■□□□□ 0.4
Znf235Q61116 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Znf235Q61116 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Znf235Q61116 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Znf235Q61116 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms