Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Mre11Q61216 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Mre11Q61216 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mre11Q61216 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mre11Q61216 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Mre11Q61216 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Mre11Q61216 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.26■□□□□ 0.83
Mre11Q61216 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.26■□□□□ 0.83
Mre11Q61216 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Mre11Q61216 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Mre11Q61216 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Mre11Q61216 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.26■□□□□ 0.83
Mre11Q61216 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.26■□□□□ 0.83
Mre11Q61216 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.26■□□□□ 0.83
Mre11Q61216 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.26■□□□□ 0.83
Mre11Q61216 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mre11Q61216 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Mre11Q61216 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Mre11Q61216 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Mre11Q61216 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Mre11Q61216 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.25■□□□□ 0.83
Mre11Q61216 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Mre11Q61216 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mre11Q61216 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.24■□□□□ 0.83
Mre11Q61216 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Mre11Q61216 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mre11Q61216 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.24■□□□□ 0.83
Mre11Q61216 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Mre11Q61216 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Mre11Q61216 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mre11Q61216 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mre11Q61216 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.24■□□□□ 0.83
Mre11Q61216 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.24■□□□□ 0.83
Mre11Q61216 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mre11Q61216 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mre11Q61216 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.23■□□□□ 0.83
Mre11Q61216 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Mre11Q61216 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.23■□□□□ 0.83
Mre11Q61216 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Gm9988-201ENSMUST00000069786 435 ntBASIC20.23■□□□□ 0.83
Mre11Q61216 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mre11Q61216 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mre11Q61216 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mre11Q61216 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms