Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Gm37025-201ENSMUST00000195159 829 ntBASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1aP25118 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Gm10698-201ENSMUST00000182663 604 ntBASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1aP25118 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Gm13168-201ENSMUST00000121771 632 ntBASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf1aP25118 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfrsf1aP25118 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfrsf1aP25118 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfrsf1aP25118 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfrsf1aP25118 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms