Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Uspl1Q3ULM6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Uspl1Q3ULM6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Uspl1Q3ULM6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Uspl1Q3ULM6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Uspl1Q3ULM6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Gm26039-201ENSMUST00000158152 144 ntBASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uspl1Q3ULM6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Gm22697-201ENSMUST00000175194 63 ntBASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Gm21559-201ENSMUST00000220638 855 ntBASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Gm8587-201ENSMUST00000076538 843 ntBASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uspl1Q3ULM6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Gm44450-201ENSMUST00000199528 114 ntBASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uspl1Q3ULM6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.89■■□□□ 1.1
Uspl1Q3ULM6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Uspl1Q3ULM6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Uspl1Q3ULM6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Uspl1Q3ULM6 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.89■■□□□ 1.1
Uspl1Q3ULM6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Uspl1Q3ULM6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.89■■□□□ 1.09
Uspl1Q3ULM6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Uspl1Q3ULM6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Uspl1Q3ULM6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Uspl1Q3ULM6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Uspl1Q3ULM6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.89■■□□□ 1.09
Uspl1Q3ULM6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Uspl1Q3ULM6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms