Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smco4Q9JIS3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smco4Q9JIS3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smco4Q9JIS3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Smco4Q9JIS3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smco4Q9JIS3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smco4Q9JIS3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smco4Q9JIS3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.76□□□□□ -0.21
Smco4Q9JIS3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smco4Q9JIS3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smco4Q9JIS3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 182.7 ms