Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd1Q61345 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.68■□□□□ 0.74
Foxd1Q61345 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd1Q61345 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd1Q61345 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd1Q61345 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd1Q61345 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd1Q61345 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Foxd1Q61345 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd1Q61345 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd1Q61345 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.67■□□□□ 0.74
Foxd1Q61345 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.67■□□□□ 0.74
Foxd1Q61345 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.67■□□□□ 0.74
Foxd1Q61345 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd1Q61345 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Foxd1Q61345 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Foxd1Q61345 Gm11779-201ENSMUST00000118541 368 ntBASIC19.66■□□□□ 0.74
Foxd1Q61345 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.66■□□□□ 0.74
Foxd1Q61345 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.66■□□□□ 0.74
Foxd1Q61345 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Foxd1Q61345 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd1Q61345 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.65■□□□□ 0.74
Foxd1Q61345 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Foxd1Q61345 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.65■□□□□ 0.74
Foxd1Q61345 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.65■□□□□ 0.74
Foxd1Q61345 Gm7213-201ENSMUST00000215977 950 ntBASIC19.65■□□□□ 0.74
Foxd1Q61345 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.65■□□□□ 0.74
Foxd1Q61345 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Foxd1Q61345 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.65■□□□□ 0.74
Foxd1Q61345 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd1Q61345 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Foxd1Q61345 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.64■□□□□ 0.73
Foxd1Q61345 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
Foxd1Q61345 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.64■□□□□ 0.73
Foxd1Q61345 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd1Q61345 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd1Q61345 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Foxd1Q61345 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd1Q61345 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Foxd1Q61345 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.63■□□□□ 0.73
Foxd1Q61345 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Foxd1Q61345 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.63■□□□□ 0.73
Foxd1Q61345 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.63■□□□□ 0.73
Foxd1Q61345 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.63■□□□□ 0.73
Foxd1Q61345 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd1Q61345 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Foxd1Q61345 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Foxd1Q61345 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd1Q61345 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd1Q61345 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Foxd1Q61345 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.62■□□□□ 0.73
Foxd1Q61345 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.62■□□□□ 0.73
Foxd1Q61345 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd1Q61345 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.62■□□□□ 0.73
Foxd1Q61345 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Foxd1Q61345 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Foxd1Q61345 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.62■□□□□ 0.73
Foxd1Q61345 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd1Q61345 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms