Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm11236J3QMS7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm11236J3QMS7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm11236J3QMS7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Gm7461-201ENSMUST00000058918 827 ntBASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11236J3QMS7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11236J3QMS7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11236J3QMS7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Gm12895-201ENSMUST00000122214 226 ntBASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11236J3QMS7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11236J3QMS7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Gm11236J3QMS7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.77■□□□□ 0.44
Gm11236J3QMS7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm11236J3QMS7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm11236J3QMS7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm11236J3QMS7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm11236J3QMS7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms