Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgn5Q9JL35 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hmgn5Q9JL35 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmgn5Q9JL35 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmgn5Q9JL35 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmgn5Q9JL35 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Hmgn5Q9JL35 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.33■□□□□ 0.68
Hmgn5Q9JL35 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn5Q9JL35 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn5Q9JL35 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn5Q9JL35 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn5Q9JL35 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn5Q9JL35 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn5Q9JL35 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgn5Q9JL35 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Hmgn5Q9JL35 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgn5Q9JL35 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn5Q9JL35 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn5Q9JL35 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.3■□□□□ 0.68
Hmgn5Q9JL35 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn5Q9JL35 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hmgn5Q9JL35 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hmgn5Q9JL35 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgn5Q9JL35 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgn5Q9JL35 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms