Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Serp2-204ENSMUST00000228055 705 ntBASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smco4Q9JIS3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Gm10232-201ENSMUST00000089221 720 ntBASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smco4Q9JIS3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Gm40881-201ENSMUST00000223397 166 ntBASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smco4Q9JIS3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smco4Q9JIS3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms