Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 snR61snR61 90 nt-2.58□□□□□ -2.82
RRP40Q08285 YDR034C-AYDR034C-A 177 nt-2.6□□□□□ -2.83
RRP40Q08285 snR85snR85 171 nt-2.66□□□□□ -2.84
RRP40Q08285 snR62snR62 100 nt-2.7□□□□□ -2.84
RRP40Q08285 YDL159W-AYDL159W-A 132 nt-2.76□□□□□ -2.85
RRP40Q08285 YGR122C-AYGR122C-A 129 nt-2.8□□□□□ -2.86
RRP40Q08285 YNL170WYNL170W 396 nt-2.8□□□□□ -2.86
RRP40Q08285 YDR524C-AYDR524C-A 120 nt-2.86□□□□□ -2.87
RRP40Q08285 snR64snR64 101 nt-2.88□□□□□ -2.87
RRP40Q08285 YLR294CYLR294C 330 nt-2.9□□□□□ -2.87
RRP40Q08285 YJR162CYJR162C 351 nt-2.93□□□□□ -2.88
RRP40Q08285 YOR225WYOR225W 330 nt-2.96□□□□□ -2.88
RRP40Q08285 ATP8Q0080 147 nt-3.19□□□□□ -2.92
RRP40Q08285 YKL096C-BYKL096C-B 150 nt-3.19□□□□□ -2.92
RRP40Q08285 YMR326CYMR326C 309 nt-3.34□□□□□ -2.94
RRP40Q08285 snR87snR87 109 nt-3.35□□□□□ -2.95
RRP40Q08285 Q0143Q0143 153 nt-3.38□□□□□ -2.95
RRP40Q08285 YHR217CYHR217C 462 nt-3.4□□□□□ -2.95
RRP40Q08285 YLL066W-BYLL066W-B 171 nt-3.41□□□□□ -2.96
RRP40Q08285 snR53snR53 91 nt-3.43□□□□□ -2.96
RRP40Q08285 snR58snR58 96 nt-3.46□□□□□ -2.96
RRP40Q08285 YLR149C-AYLR149C-A 87 nt-3.55□□□□□ -2.98
RRP40Q08285 Q0092Q0092 141 nt-3.72□□□□□ -3
RRP40Q08285 snR40snR40 97 nt-3.79□□□□□ -3.02
RRP40Q08285 YBL109WYBL109W 336 nt-3.85□□□□□ -3.03
RRP40Q08285 YJL136W-AYJL136W-A 84 nt-3.88□□□□□ -3.03
RRP40Q08285 tC(GCA)QtC(GCA)Q 76 nt-3.92□□□□□ -3.04
RRP40Q08285 YDL247W-AYDL247W-A 75 nt-4.11□□□□□ -3.07
RRP40Q08285 snR75snR75 89 nt-5.02□□□□□ -3.21
Retrieved 29 of 7,029 protein–RNA pairs in 21.2 ms