Protein–RNA interactions for Protein: Q08004

BUD20, Bud site selection protein 20, yeastyeast

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BUD20Q08004 tF(GAA)H1tF(GAA)H1 73 nt0.44□□□□□ -2.34
BUD20Q08004 tF(GAA)H2tF(GAA)H2 73 nt0.44□□□□□ -2.34
BUD20Q08004 tF(GAA)MtF(GAA)M 73 nt0.44□□□□□ -2.34
BUD20Q08004 tF(GAA)P1tF(GAA)P1 73 nt0.44□□□□□ -2.34
BUD20Q08004 tF(GAA)P2tF(GAA)P2 73 nt0.44□□□□□ -2.34
BUD20Q08004 YOL013W-AYOL013W-A 192 nt0.43□□□□□ -2.34
BUD20Q08004 snR6snR6 112 nt0.37□□□□□ -2.35
BUD20Q08004 YOL014WYOL014W 375 nt0.29□□□□□ -2.36
BUD20Q08004 snR58snR58 96 nt0.28□□□□□ -2.36
BUD20Q08004 snR73snR73 106 nt0.2□□□□□ -2.38
BUD20Q08004 CDC65tQ(CUG)M 72 nt0.02□□□□□ -2.41
BUD20Q08004 YMR315W-AYMR315W-A 108 nt-0.04□□□□□ -2.42
BUD20Q08004 URB1YKL014C 5295 nt-0.06□□□□□ -2.42
BUD20Q08004 YHL009W-BYHL009W-B 5409 nt-0.19□□□□□ -2.44
BUD20Q08004 YOR309CYOR309C 381 nt-0.39□□□□□ -2.47
BUD20Q08004 snR87snR87 109 nt-0.45□□□□□ -2.48
BUD20Q08004 tP(UGG)QtP(UGG)Q 72 nt-0.48□□□□□ -2.49
BUD20Q08004 snR33snR33 183 nt-0.52□□□□□ -2.49
BUD20Q08004 tT(UGU)G1tT(UGU)G1 72 nt-0.75□□□□□ -2.53
BUD20Q08004 tT(UGU)G2tT(UGU)G2 72 nt-0.75□□□□□ -2.53
BUD20Q08004 tT(UGU)PtT(UGU)P 72 nt-0.75□□□□□ -2.53
BUD20Q08004 tY(GUA)QtY(GUA)Q 84 nt-1□□□□□ -2.57
BUD20Q08004 YBR223W-AYBR223W-A 120 nt-1.05□□□□□ -2.58
BUD20Q08004 YNR077CYNR077C 255 nt-1.29□□□□□ -2.62
BUD20Q08004 YBR126W-BYBR126W-B 144 nt-1.99□□□□□ -2.73
BUD20Q08004 YJL136W-AYJL136W-A 84 nt-2.35□□□□□ -2.79
BUD20Q08004 YDR543CYDR543C 300 nt-2.38□□□□□ -2.79
BUD20Q08004 YOL166W-AYOL166W-A 156 nt-2.69□□□□□ -2.84
BUD20Q08004 YJR162CYJR162C 351 nt-3.39□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 71.7 ms