Protein–RNA interactions for Protein: Q06147

LCB5, Sphingoid long chain base kinase 5, yeastyeast

Known RBP Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB5Q06147 FMP27YLR454W 7887 nt0.69□□□□□ -2.3
LCB5Q06147 snR6snR6 112 nt0.69□□□□□ -2.3
LCB5Q06147 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
LCB5Q06147 snR128snR128 126 nt0.6□□□□□ -2.31
LCB5Q06147 snR58snR58 96 nt0.59□□□□□ -2.31
LCB5Q06147 YJL113WYJL113W 4647 nt0.59□□□□□ -2.31
LCB5Q06147 snR161snR161 161 nt0.57□□□□□ -2.32
LCB5Q06147 snR73snR73 106 nt0.53□□□□□ -2.32
LCB5Q06147 tA(UGC)QtA(UGC)Q 76 nt0.51□□□□□ -2.33
LCB5Q06147 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
LCB5Q06147 CDC65tQ(CUG)M 72 nt0.22□□□□□ -2.37
LCB5Q06147 URB1YKL014C 5295 nt0.18□□□□□ -2.38
LCB5Q06147 YMR315W-AYMR315W-A 108 nt0.17□□□□□ -2.38
LCB5Q06147 snR87snR87 109 nt0.03□□□□□ -2.4
LCB5Q06147 YOR309CYOR309C 381 nt-0.05□□□□□ -2.42
LCB5Q06147 YHL009W-BYHL009W-B 5409 nt-0.14□□□□□ -2.43
LCB5Q06147 tP(UGG)QtP(UGG)Q 72 nt-0.23□□□□□ -2.45
LCB5Q06147 snR33snR33 183 nt-0.37□□□□□ -2.47
LCB5Q06147 tT(UGU)G1tT(UGU)G1 72 nt-0.46□□□□□ -2.48
LCB5Q06147 tT(UGU)G2tT(UGU)G2 72 nt-0.46□□□□□ -2.48
LCB5Q06147 tT(UGU)PtT(UGU)P 72 nt-0.46□□□□□ -2.48
LCB5Q06147 YNR077CYNR077C 255 nt-0.58□□□□□ -2.5
LCB5Q06147 YBR223W-AYBR223W-A 120 nt-0.64□□□□□ -2.51
LCB5Q06147 tY(GUA)QtY(GUA)Q 84 nt-0.73□□□□□ -2.53
LCB5Q06147 YOL166W-AYOL166W-A 156 nt-1.38□□□□□ -2.63
LCB5Q06147 YBR126W-BYBR126W-B 144 nt-1.38□□□□□ -2.63
LCB5Q06147 YDR543CYDR543C 300 nt-1.42□□□□□ -2.64
LCB5Q06147 YJL136W-AYJL136W-A 84 nt-1.57□□□□□ -2.66
LCB5Q06147 YJR162CYJR162C 351 nt-2.2□□□□□ -2.76
Retrieved 29 of 7,029 protein–RNA pairs in 2.7 ms