Protein–RNA interactions for Protein: Q04301

VBA1, Vacuolar basic amino acid transporter 1, yeastyeast

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA1Q04301 snR85snR85 171 nt-2.18□□□□□ -2.76
VBA1Q04301 snR62snR62 100 nt-2.24□□□□□ -2.77
VBA1Q04301 YGR122C-AYGR122C-A 129 nt-2.25□□□□□ -2.77
VBA1Q04301 YDL159W-AYDL159W-A 132 nt-2.28□□□□□ -2.77
VBA1Q04301 YNL170WYNL170W 396 nt-2.29□□□□□ -2.78
VBA1Q04301 snR64snR64 101 nt-2.38□□□□□ -2.79
VBA1Q04301 YLR294CYLR294C 330 nt-2.38□□□□□ -2.79
VBA1Q04301 YDR543CYDR543C 300 nt-2.47□□□□□ -2.8
VBA1Q04301 YOR225WYOR225W 330 nt-2.51□□□□□ -2.81
VBA1Q04301 YDR524C-AYDR524C-A 120 nt-2.61□□□□□ -2.83
VBA1Q04301 YKL096C-BYKL096C-B 150 nt-2.63□□□□□ -2.83
VBA1Q04301 ATP8Q0080 147 nt-2.64□□□□□ -2.83
VBA1Q04301 YMR326CYMR326C 309 nt-2.77□□□□□ -2.85
VBA1Q04301 YLL066W-BYLL066W-B 171 nt-2.79□□□□□ -2.86
VBA1Q04301 Q0143Q0143 153 nt-2.82□□□□□ -2.86
VBA1Q04301 YHR217CYHR217C 462 nt-2.82□□□□□ -2.86
VBA1Q04301 snR87snR87 109 nt-2.83□□□□□ -2.86
VBA1Q04301 snR53snR53 91 nt-2.88□□□□□ -2.87
VBA1Q04301 snR58snR58 96 nt-2.89□□□□□ -2.87
VBA1Q04301 YOL166W-AYOL166W-A 156 nt-2.89□□□□□ -2.87
VBA1Q04301 YLR149C-AYLR149C-A 87 nt-2.98□□□□□ -2.89
VBA1Q04301 Q0092Q0092 141 nt-3.05□□□□□ -2.9
VBA1Q04301 snR40snR40 97 nt-3.11□□□□□ -2.91
VBA1Q04301 YBL109WYBL109W 336 nt-3.13□□□□□ -2.91
VBA1Q04301 tC(GCA)QtC(GCA)Q 76 nt-3.25□□□□□ -2.93
VBA1Q04301 YDL247W-AYDL247W-A 75 nt-3.34□□□□□ -2.94
VBA1Q04301 YJR162CYJR162C 351 nt-3.48□□□□□ -2.97
VBA1Q04301 YJL136W-AYJL136W-A 84 nt-4.01□□□□□ -3.05
VBA1Q04301 snR75snR75 89 nt-4.11□□□□□ -3.07
Retrieved 29 of 7,029 protein–RNA pairs in 84 ms